RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 DNAJB5O75953 348 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ATP1A3P13637 1013 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RGS7P49802 495 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 TIMM10P62072 90 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 TAF1BQ53T94 588 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 TNFAIP8L3Q5GJ75 292 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PRR5LQ6MZQ0 368 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RINT1Q6NUQ1 792 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 TRIM65Q6PJ69 517 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RFPL4BQ6ZWI9 263 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ARPINQ7Z6K5 226 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 IFNLR1Q8IU57 520 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PPHLN1Q8NEY8 458 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 UBASH3BQ8TF42 649 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 AENQ8WTP8 325 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PTCD2Q8WV60 388 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RFKQ969G6 155 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PIGUQ9H490 435 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GDAP2Q9NXN4 497 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF219Q9P2Y4 722 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GGA1Q9UJY5 639 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 MED16Q9Y2X0 877 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PXDNLA1KZ92 1463 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PLEKHA8P1O95397 391 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SPATS1Q496A3 300 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 MDH1BQ5I0G3 518 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 METTL11BQ5VVY1 283 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 KIAA1841Q6NSI8 718 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 FAM180BQ6P0A1 224 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ARSKQ6UWY0 536 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 CD302Q8IX05 232 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ATAD1Q8NBU5 361 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RAB34Q9BZG1 259 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SH3GLB2Q9NR46 395 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ERVK-19Q9WJR5 959 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RPH3AQ9Y2J0 694 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PTPDC1A2A3K4 754 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 PLD2O14939 933 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 MOCS3O95396 460 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RBL1P28749 1068 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 HSD17B2P37059 387 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ALDH6A1Q02252 535 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC24Q50LG9 513 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GALNT12Q8IXK2 581 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ALDH16A1Q8IZ83 802 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GANCQ8TET4 914 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF560Q96MR9 790 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 CIB1Q99828 191 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GPRC5DQ9NZD1 345 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 COL3A1P02461 1466 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 E9PBE3 544 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 KCNK1O00180 336 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 HEXBP07686 556 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 CLTBP09497 229 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 MSR1P21757 451 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 CMA1P23946 247 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 CAPZA1P52907 286 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 RAD23AP54725 363 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 RPL10AP62906 217 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 PNOCQ13519 176 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ATP13A4Q4VNC1 1196 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 EFHC1Q5JVL4 640 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF658Q5TYW1 1059 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF772Q68DY9 489 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 SNRNP48Q6IEG0 339 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 C16orf86Q6ZW13 317 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 BBS5Q8N3I7 341 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 C19orf60Q96EN9 201 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 BBS2Q9BXC9 721 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ACTR3BQ9P1U1 418 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 KIAA1257Q9ULG3 409 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 SNX12Q9UMY4 172 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 CLDN25C9JDP6 229 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 MAP3K13O43283 966 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ENTPD5O75356 428 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 DRD4P21917 467 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 CDC27P30260 824 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 CTNNB1P35222 781 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ACADSBP45954 432 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 PSMC6P62333 389 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ASIC1P78348 528 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 FOLH1Q04609 750 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 PTK7Q13308 1070 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 NCAPHQ15003 741 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 EPHA7Q15375 998 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 MAPRE1Q15691 268 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ANO4Q32M45 955 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 KLHDC10Q6PID8 442 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 UTS2BQ765I0 119 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 OR8H2Q8N162 312 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 TTC29Q8NA56 475 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 TMEM87BQ96K49 555 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 BBS4Q96RK4 519 aa6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ZC3H12CQ9C0D7 883 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 TLR7Q9NYK1 1049 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-201ENST00000257290 ATP10DQ9P241 1426 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 IFT172Q9UG01 1749 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNJ18B7U540 433 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 PFKFB1P16118 471 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms