RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 TRPC4Q9UBN4 977 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 LCMT1Q9UIC8 334 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 CCR4P51679 360 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 PRKCZQ05513 592 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 MTBPQ96DY7 904 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 C7orf25Q9BPX7 421 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 ZW10O43264 779 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 TBL3Q12788 808 aaKnown RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 ITGA7Q13683 1181 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 FAM83AQ86UY5 434 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.49■□□□□ 0.39
SORT1-201ENST00000256637 TGM2P21980 687 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 TRPC1P48995 793 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 ZSCAN26Q16670 478 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 NOMO2Q5JPE7 1267 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 UNC45BQ8IWX7 931 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 NPHS2Q9NP85 383 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 DNAJC16Q9Y2G8 782 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 PDS5AQ29RF7 1337 aaKnown RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 PLA2G6O60733 806 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 TADA3O75528 432 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 VIL1P09327 827 aaKnown RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 ORC2Q13416 577 aaPredicted RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 POU6F1Q14863 301 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 KHDRBS2Q5VWX1 349 aaKnown RBP17.49■□□□□ 0.39
SORT1-201ENST00000256637 HORMAD1Q86X24 394 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 SEMA4DQ92854 862 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 COL26A1Q96A83 441 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 CLDND1Q9NY35 253 aa17.49■□□□□ 0.39
SORT1-201ENST00000256637 GTF2E2P29084 291 aaKnown RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 EXOSC10Q01780 885 aaKnown RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 RAP1GAP2Q684P5 730 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 ATP8B4Q8TF62 1192 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 LRRN4Q8WUT4 740 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 WDR19Q8NEZ3 1342 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3DA0A087WVF3 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3IA0A087WXS9 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3EA0A087X179 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3KA0A087X1G2 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3FA6NER0 549 aaPredicted RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3LB9A6J9 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 CCNT2O60583 730 aaKnown RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 HMGCRP04035 888 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3HP0C7X1 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 HDCP19113 662 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 WSCD1Q658N2 575 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3GQ6DHY5 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3CQ6IPX1 549 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 CATSPERGQ6ZRH7 1159 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TBC1D3Q8IZP1 549 aaPredicted RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 SLC2A14Q8TDB8 520 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TCF25Q9BQ70 676 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 ADGRE3Q9BY15 652 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TM6SF2Q9BZW4 377 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 VPS26AO75436 327 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 CYP11B2P19099 503 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 TRIM32Q13049 653 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 CELF3Q5SZQ8 465 aaKnown RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 TATDN2Q93075 761 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 KIAA1683Q9H0B3 1180 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 NEU2Q9Y3R4 380 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 IFNA16P05015 189 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 RAET1GQ6H3X3 334 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 ADNPQ9H2P0 1102 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 UXTQ9UBK9 157 aaPredicted RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 STIP1P31948 543 aaKnown RBP17.48■□□□□ 0.39
SORT1-201ENST00000256637 DPF2Q92785 391 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 C9orf72Q96LT7 481 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 ECT2Q9H8V3 914 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 WDR35Q9P2L0 1181 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 VTI1BQ9UEU0 232 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 ST3GAL5Q9UNP4 418 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
SORT1-201ENST00000256637 GSAPA4D1B5 854 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 UGT3A1Q6NUS8 523 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 ARMCX6Q7L4S7 300 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 CELF4Q9BZC1 486 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 RPS7P62081 194 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 TARBP2Q15633 366 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 OR6K2Q8NGY2 324 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 SMARCD1Q96GM5 515 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 MSCO60682 206 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 RAB27AP51159 221 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 ZNF200P98182 395 aaPredicted RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 SRSF11Q05519 484 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 ACTN3Q08043 901 aaPredicted RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 BYSLQ13895 437 aaKnown RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 HLA-DQA1Q5Y7H0 255 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 SLC27A1Q6PCB7 646 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 TMED8Q6PL24 325 aaPredicted RBP17.47■□□□□ 0.39
SORT1-201ENST00000256637 GLT6D1Q7Z4J2 308 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 SCLYQ96I15 445 aa17.47■□□□□ 0.39
SORT1-201ENST00000256637 CISHQ9NSE2 258 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms