RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SCD5Q86SK9 330 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 WBP2Q969T9 261 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 ZSWIM1Q9BR11 485 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 CRACR2AQ9BSW2 395 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 FBRSL1Q9HCM7 1045 aaKnown RBP24.19■■□□□ 1.46
LSM4-201ENST00000252816 CYLDQ9NQC7 956 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 PRMT8Q9NR22 394 aaPredicted RBP24.19■■□□□ 1.46
LSM4-201ENST00000252816 MYO16Q9Y6X6 1858 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 TRDMT1O14717 391 aaKnown RBP24.18■■□□□ 1.46
LSM4-201ENST00000252816 CALCAP01258 141 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 PAEPP09466 180 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 ERCC5P28715 1186 aaPredicted RBP24.18■■□□□ 1.46
LSM4-201ENST00000252816 CSTF1Q05048 431 aaKnown RBP24.18■■□□□ 1.46
LSM4-201ENST00000252816 PDE4CQ08493 712 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 TPD52L1Q16890 204 aaPredicted RBP24.18■■□□□ 1.46
LSM4-201ENST00000252816 RAB41Q5JT25 222 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 DGKKQ5KSL6 1271 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 MAMSTRQ6ZN01 415 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 DDX42Q86XP3 938 aaKnown RBP eCLIP24.18■■□□□ 1.46
LSM4-201ENST00000252816 THAP9Q9H5L6 903 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 FBXO4Q9UKT5 387 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 KIAA1257Q9ULG3 409 aa24.18■■□□□ 1.46
LSM4-201ENST00000252816 NFATC1O95644 943 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 GALK1P51570 392 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 ZNF132P52740 706 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 BCAT1P54687 386 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 GAB4Q2WGN9 574 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 TSSK4Q6SA08 328 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 RBM43Q6ZSC3 357 aaKnown RBP24.17■■□□□ 1.46
LSM4-201ENST00000252816 ADGRG2Q8IZP9 1017 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 RBBP8NLQ8NC74 664 aaPredicted RBP24.17■■□□□ 1.46
LSM4-201ENST00000252816 UBA3Q8TBC4 463 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 IER2Q9BTL4 223 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 NACA2Q9H009 215 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.17■■□□□ 1.46
LSM4-201ENST00000252816 DACH1Q9UI36 760 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 NUDT5Q9UKK9 219 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 R4GN57 208 aa24.17■■□□□ 1.46
LSM4-201ENST00000252816 E2F8A0AVK6 867 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 XPO1O14980 1071 aaKnown RBP24.16■■□□□ 1.46
LSM4-201ENST00000252816 MDM4O15151 490 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 CYP17A1P05093 508 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 RARGP13631 454 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 MTIF2P46199 727 aaKnown RBP24.16■■□□□ 1.46
LSM4-201ENST00000252816 SLC8A3P57103 927 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 AMPD2Q01433 879 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 BST2Q10589 180 aaKnown RBP24.16■■□□□ 1.46
LSM4-201ENST00000252816 PKDCCQ504Y2 493 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 LCLAT1Q6UWP7 414 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 KLF16Q9BXK1 252 aaPredicted RBP24.16■■□□□ 1.46
LSM4-201ENST00000252816 UBE2TQ9NPD8 197 aaPredicted RBP24.16■■□□□ 1.46
LSM4-201ENST00000252816 HESX1Q9UBX0 185 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 NAGPAQ9UK23 515 aa24.16■■□□□ 1.46
LSM4-201ENST00000252816 GOLGA6L22H0YM25 854 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 SLC9A3R1O14745 358 aaPredicted RBP24.15■■□□□ 1.46
LSM4-201ENST00000252816 EGFP01133 1207 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 IRF1P10914 325 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 SLC9A1P19634 815 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 BRD2P25440 801 aaKnown RBP24.15■■□□□ 1.46
LSM4-201ENST00000252816 ATP5C1P36542 298 aaKnown RBP24.15■■□□□ 1.46
LSM4-201ENST00000252816 TKTL1P51854 596 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 SATB1Q01826 763 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 APBA1Q02410 837 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 GRSF1Q12849 480 aaKnown RBP eCLIP24.15■■□□□ 1.46
LSM4-201ENST00000252816 NR1H3Q13133 447 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 ZNF528Q3MIS6 628 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 HSP90AA4PQ58FG1 418 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 GJB7Q6PEY0 223 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 TRIM65Q6PJ69 517 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 P2RY13Q9BPV8 354 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 C2orf42Q9NWW7 574 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 CNTN6Q9UQ52 1028 aa24.15■■□□□ 1.46
LSM4-201ENST00000252816 GREM1O60565 184 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 TDGF1P13385 188 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 PSEN1P49768 467 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 DHCR24Q15392 516 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 CNGA2Q16280 664 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 KLHDC10Q6PID8 442 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 RHBDF2Q6PJF5 856 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 BBS7Q8IWZ6 715 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 SYNPOQ8N3V7 929 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 SPEM1Q8N4L4 309 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 NDRG1Q92597 394 aaKnown RBP24.14■■□□□ 1.45
LSM4-201ENST00000252816 EZH1Q92800 747 aaPredicted RBP24.14■■□□□ 1.45
LSM4-201ENST00000252816 CD101Q93033 1021 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 ULBP1Q9BZM6 244 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 CLIC5Q9NZA1 410 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.14■■□□□ 1.45
LSM4-201ENST00000252816 SH3BP1Q9Y3L3 701 aa24.14■■□□□ 1.45
LSM4-201ENST00000252816 SETSIPP0DME0 302 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 OPRD1P41143 372 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 PLA2G4AP47712 749 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 CCR3P51677 355 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 MAN2A1Q16706 1144 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 EXOC3L4Q17RC7 722 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 C10orf120Q5SQS8 335 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 PM20D1Q6GTS8 502 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 PKN3Q6P5Z2 889 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 GBP6Q6ZN66 633 aa24.13■■□□□ 1.45
LSM4-201ENST00000252816 BHLHA9Q7RTU4 235 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms