RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 USP41Q3LFD5 358 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 SLC25A52Q3SY17 297 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 MAP9Q49MG5 647 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 KCNT2Q6UVM3 1135 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 VSTM1Q6UX27 236 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 MFSD7Q6UXD7 560 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 GPRIN1Q7Z2K8 1008 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 MAP7D3Q8IWC1 876 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 CMTR2Q8IYT2 770 aaKnown RBP19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 PRELID2Q8N945 189 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 HDAC7Q8WUI4 952 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 IRGQQ8WZA9 623 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 ACSF2Q96CM8 615 aaPredicted RBP19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 IGSF21Q96ID5 467 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 YME1L1Q96TA2 773 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 TBCBQ99426 244 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 TRIM62Q9BVG3 475 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 ARFGAP3Q9NP61 516 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 DMGDHQ9UI17 866 aaKnown RBP19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 RASAL2Q9UJF2 1139 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 TCRBV7S2A1N4TA0A589 114 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 TRIM66O15016 1216 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 ZMYND10O75800 440 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 FGBP02675 491 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 KDELR1P24390 212 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 DR1Q01658 176 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 GUCY2DQ02846 1103 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 DHX34Q14147 1143 aaKnown RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 STRADAQ7RTN6 431 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 TMEM173Q86WV6 379 aaPredicted RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 CCDC105Q8IYK2 499 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 MAK16Q9BXY0 300 aaKnown RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 UTP11Q9Y3A2 253 aaKnown RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 LTFP02788 710 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 SYN1P17600 705 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 LAG3P18627 525 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 PTPN7P35236 360 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 CLCN6P51797 869 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 KRT81Q14533 505 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 CYP1B1Q16678 543 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 RTP2Q5QGT7 225 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 CCDC137Q6PK04 289 aaKnown RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 SCML4Q8N228 414 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 CMASQ8NFW8 434 aaPredicted RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 TEKT4Q8WW24 435 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 CENPIQ92674 756 aaPredicted RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 TMEM169Q96HH4 297 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 PGLYRP2Q96PD5 576 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 SLC2A13Q96QE2 648 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 PLEKHA4Q9H4M7 779 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 EPB41L5Q9HCM4 733 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 FEZ2Q9UHY8 353 aaPredicted RBP19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 EFR3BQ9Y2G0 817 aa19.56■□□□□ 0.72
TNFSF9-201ENST00000245817 FAM187AA6NFU0 413 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 YJEFN3A6XGL0 299 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 E7ENQ6 273 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 NCAM1P13591 858 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 KRT10P13645 584 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 COILP38432 576 aaPredicted RBP19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 CDKN2BP42772 138 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 FNTAP49354 379 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 HDAC4P56524 1084 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 FPGSQ05932 587 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 PM20D1Q6GTS8 502 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 TAS1R1Q7RTX1 841 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 TMCO2Q7Z6W1 182 aaPredicted RBP19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 BCL7CQ8WUZ0 217 aaPredicted RBP19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 C1orf54Q8WWF1 131 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 HINFPQ9BQA5 517 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 CALN1Q9BXU9 219 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 RAB17Q9H0T7 212 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 LRRC19Q9H756 370 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 RRN3Q9NYV6 651 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 PCYOX1Q9UHG3 505 aa19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 ZMYND8Q9ULU4 1186 aaPredicted RBP19.55■□□□□ 0.72
TNFSF9-201ENST00000245817 hCG_1818297A0A087WSY0 165 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 MAGEA11P43364 429 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 SLC5A3P53794 718 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 CDH6P55285 790 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 IFRD2Q12894 506 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 GPR17Q13304 367 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 KLF1Q13351 362 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 PDK2Q15119 407 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 SIX1Q15475 284 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 FNDC1Q4ZHG4 1894 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 ERMARDQ5T6L9 678 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 CCNI2Q6ZMN8 369 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 C12orf50Q8NA57 414 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 SPPL2BQ8TCT7 592 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 C2orf15Q8WU43 125 aaKnown RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 HNRNPLLQ8WVV9 542 aaKnown RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 RIN2Q8WYP3 895 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 BADQ92934 168 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 C8orf48Q96LL4 319 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 PEBP4Q96S96 227 aa19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 C11orf84Q9BUA3 381 aaPredicted RBP19.54■□□□□ 0.72
TNFSF9-201ENST00000245817 M0QYT0 321 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 MDM4O15151 490 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 TTI1O43156 1089 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms