RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 VEPH1Q14D04 833 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 CCDC85BQ15834 202 aaPredicted RBP21.15■□□□□ 0.98
SNRPA-201ENST00000243563 ANKRD54Q6NXT1 300 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 EMC1Q8N766 993 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 C3orf20Q8ND61 904 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 CORO1BQ9BR76 489 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 PRKD2Q9BZL6 878 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 OSGEPQ9NPF4 335 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 ZDHHC7Q9NXF8 308 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 TMEM59LQ9UK28 342 aa21.15■□□□□ 0.98
SNRPA-201ENST00000243563 XIRP2A4UGR9 3374 aa21.14■□□□□ 0.98
SNRPA-201ENST00000243563 HNRNPA1P09651 372 aaKnown RBP eCLIP21.14■□□□□ 0.97
SNRPA-201ENST00000243563 GJA1P17302 382 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 ARHGAP25P42331 645 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 GPC5P78333 572 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 C10orf76Q5T2E6 689 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 GAREM2Q75VX8 874 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 SCML4Q8N228 414 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 MSANTD4Q8NCY6 345 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 TRMT2BQ96GJ1 504 aaKnown RBP21.14■□□□□ 0.97
SNRPA-201ENST00000243563 CEP295NLQ96MC4 621 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 ADAM33Q9BZ11 813 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 SFXN1Q9H9B4 322 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 CLDND1Q9NY35 253 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 SPTBN5Q9NRC6 3674 aaKnown RBP21.14■□□□□ 0.97
SNRPA-201ENST00000243563 BRWD1Q9NSI6 2320 aa21.14■□□□□ 0.97
SNRPA-201ENST00000243563 DENND4AQ7Z401 1863 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 SPDYE4A6NLX3 237 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 PJA2O43164 708 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 NRDCO43847 1150 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 FBXO21O94952 628 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 F11P03951 625 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 FLT3P36888 993 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 PITX1P78337 314 aaPredicted RBP21.13■□□□□ 0.97
SNRPA-201ENST00000243563 KRT83P78385 493 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 OGDHQ02218 1023 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 SLC5A9Q2M3M2 681 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 DNAJC24Q6P3W2 148 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 POTEHQ6S545 545 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 SLC26A9Q7LBE3 791 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 KIAA1328Q86T90 577 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 CTNNBL1Q8WYA6 563 aaPredicted RBP21.13■□□□□ 0.97
SNRPA-201ENST00000243563 EDEM1Q92611 657 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 TCEAL4Q96EI5 215 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 BTBD6Q96KE9 485 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 ZNF512Q96ME7 567 aaPredicted RBP21.13■□□□□ 0.97
SNRPA-201ENST00000243563 FBXO44Q9H4M3 255 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 AVENQ9NQS1 362 aaPredicted RBP21.13■□□□□ 0.97
SNRPA-201ENST00000243563 DZANK1Q9NVP4 752 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 NUDT5Q9UKK9 219 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 INTUQ9ULD6 942 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 STRIP2Q9ULQ0 834 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 ASB3Q9Y575 518 aa21.13■□□□□ 0.97
SNRPA-201ENST00000243563 MOSPD3O75425 235 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 CCDC175P0C221 793 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 ZDHHC11BP0C7U3 371 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 MYBL1P10243 752 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 RFC1P35251 1148 aaPredicted RBP21.12■□□□□ 0.97
SNRPA-201ENST00000243563 RNASE9P60153 205 aaKnown RBP21.12■□□□□ 0.97
SNRPA-201ENST00000243563 ZNF252P-AS1Q0IIN9 211 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 PPP1R2P3Q6NXS1 205 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 RTL10Q7L3V2 364 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 GRASPQ7Z6J2 395 aaPredicted RBP21.12■□□□□ 0.97
SNRPA-201ENST00000243563 ITIH5Q86UX2 942 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 CPNE8Q86YQ8 564 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 REXO1L1PQ8IX06 675 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 SMG7Q92540 1137 aaKnown RBP21.12■□□□□ 0.97
SNRPA-201ENST00000243563 MCEEQ96PE7 176 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 NUP85Q9BW27 656 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 COMMD8Q9NX08 183 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 C5orf42Q9H799 3197 aa21.12■□□□□ 0.97
SNRPA-201ENST00000243563 IPO7O95373 1038 aaKnown RBP21.11■□□□□ 0.97
SNRPA-201ENST00000243563 LTFP02788 710 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 RHOP08100 348 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 MYL4P12829 197 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 FOSL2P15408 326 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 TFE3P19532 575 aaPredicted RBP21.11■□□□□ 0.97
SNRPA-201ENST00000243563 EPHA5P54756 1037 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 YWHAGP61981 247 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNRPA-201ENST00000243563 TAF12Q16514 161 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 RAB6CQ53S08 254 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 SYPL2Q5VXT5 272 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 BSPRYQ5W0U4 402 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 EP400NLQ6ZTU2 488 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 CMASQ8NFW8 434 aaPredicted RBP21.11■□□□□ 0.97
SNRPA-201ENST00000243563 SLC35G2Q8TBE7 412 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 IRGQQ8WZA9 623 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 FAM149B1Q96BN6 582 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 TRIM11Q96F44 468 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 RAB6CQ9H0N0 254 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 TRMT1Q9NXH9 659 aaKnown RBP21.11■□□□□ 0.97
SNRPA-201ENST00000243563 WDR35Q9P2L0 1181 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 NAALADL1Q9UQQ1 740 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 HELZP42694 1942 aaKnown RBP21.11■□□□□ 0.97
SNRPA-201ENST00000243563 ZNF840PA6NDX5 716 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 SIGLEC16A6NMB1 481 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 POU2F2P09086 479 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 GABRR2P28476 465 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 CYP4F8P98187 520 aa21.11■□□□□ 0.97
SNRPA-201ENST00000243563 STXBP5Q5T5C0 1151 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms