RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CDK18Q07002 472 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 BMPR2Q13873 1038 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 UBAP2LQ14157 1087 aaKnown RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 XKR3Q5GH77 459 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 ABHD15Q6UXT9 468 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 RAPH1Q70E73 1250 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 CRLF3Q8IUI8 442 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 KCNN1Q92952 543 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 RILPQ96NA2 401 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 EBF4Q9BQW3 602 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 PORCNQ9H237 461 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 EBF3Q9H4W6 596 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 SMYD2Q9NRG4 433 aa16.13■□□□□ 0.17
DDX55-201ENST00000238146 HBS1LQ9Y450 684 aaKnown RBP16.13■□□□□ 0.17
DDX55-201ENST00000238146 CHADO15335 359 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 UGT1A9O60656 530 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 SNNO75324 88 aaPredicted RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 MIPP30301 263 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 POLR2BP30876 1174 aaKnown RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 NAMPTP43490 491 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 CDK7P50613 346 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 PSMC1P62191 440 aaKnown RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 MMRN1Q13201 1228 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 DYNC1I2Q13409 638 aaKnown RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 TBCCQ15814 346 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 LIN52Q52LA3 116 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 GSTCDQ8NEC7 633 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 NCSTNQ92542 709 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 UGT1A7Q9HAW7 530 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 UGT1A10Q9HAW8 530 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 UGT1A8Q9HAW9 530 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 FKBP6O75344 327 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 LAMB3Q13751 1172 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 HNRNPDQ14103 355 aaKnown RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 NOMO1Q15155 1222 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 PDCD2Q16342 344 aaPredicted RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 XRRA1Q6P2D8 792 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 BRSK2Q8IWQ3 736 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 EPAS1Q99814 870 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 POPDC2Q9HBU9 364 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 RAB6BQ9NRW1 208 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 STK32BQ9NY57 414 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 RIPK3Q9Y572 518 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 SDR42E2A6NKP2 422 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 MEI4A8MW99 385 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 C6orf222P0C671 652 aaPredicted RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 PRKCHP24723 683 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 LGSNQ5TDP6 509 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 ADGRG6Q86SQ4 1221 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 WDR49Q8IV35 697 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 LPAR1Q92633 364 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 MKS1Q9NXB0 559 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 ZC3H7BQ9UGR2 993 aaKnown RBP16.12■□□□□ 0.17
DDX55-201ENST00000238146 SOX13Q9UN79 622 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 TBC1D30Q9Y2I9 924 aa16.12■□□□□ 0.17
DDX55-201ENST00000238146 TRUB2O95900 331 aaKnown RBP16.11■□□□□ 0.17
DDX55-201ENST00000238146 HIRAP54198 1017 aaPredicted RBP16.11■□□□□ 0.17
DDX55-201ENST00000238146 YWHAEP62258 255 aaKnown RBP16.11■□□□□ 0.17
DDX55-201ENST00000238146 PDE1BQ01064 536 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 CBLBQ13191 982 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 WDR78Q5VTH9 848 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 AAGABQ6PD74 315 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 RNF111Q6ZNA4 994 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 ZCCHC23Q6ZST2 131 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 CPXM1Q96SM3 734 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 S100A14Q9HCY8 104 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 ATP5BP06576 529 aaKnown RBP16.11■□□□□ 0.17
DDX55-201ENST00000238146 BPGMP07738 259 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 CD19P15391 556 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 AOC1P19801 751 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 ARL2P36404 184 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 AP3M2P53677 418 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 SLC25A3Q00325 362 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 WASHC5Q12768 1159 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 ACAD11Q709F0 780 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 XYLT1Q86Y38 959 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 SEPT12Q8IYM1 358 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 DHX33Q9H6R0 707 aaKnown RBP16.11■□□□□ 0.17
DDX55-201ENST00000238146 USP29Q9HBJ7 922 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 USP18Q9UMW8 372 aa16.11■□□□□ 0.17
DDX55-201ENST00000238146 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
DDX55-201ENST00000238146 HMX2A2RU54 273 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 TRDMT1O14717 391 aaKnown RBP16.1■□□□□ 0.17
DDX55-201ENST00000238146 CSH1P0DML2 217 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 CSH2P0DML3 217 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 HIC1Q14526 733 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 CAND1Q86VP6 1230 aaKnown RBP16.1■□□□□ 0.17
DDX55-201ENST00000238146 RASSF3Q86WH2 238 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 PDSS2Q86YH6 399 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 NDUFAF2Q8N183 169 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 OR6Y1Q8NGX8 325 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 RAB3IL1Q8TBN0 382 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 PYDC1Q8WXC3 89 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 CENPKQ9BS16 269 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms