RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 BHLHA9Q7RTU4 235 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 SCD5Q86SK9 330 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 XYLT1Q86Y38 959 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 MSANTD4Q8NCY6 345 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 SHKBP1Q8TBC3 707 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 IPO4Q8TEX9 1081 aaKnown RBP10.68□□□□□ -0.7
HMGCL-201ENST00000235958 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGCL-201ENST00000235958 RIPOR3Q96MK2 946 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 PPP1R9BQ96SB3 815 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 ATXN3LQ9H3M9 355 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 NMUR1Q9HB89 426 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 PRDM6Q9NQX0 595 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 TLR8Q9NR97 1041 aaKnown RBP10.68□□□□□ -0.7
HMGCL-201ENST00000235958 SPTLC3Q9NUV7 552 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 TRPM5Q9NZQ8 1165 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 GMIPQ9P107 970 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 NENFQ9UMX5 172 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 MRPS23Q9Y3D9 190 aaKnown RBP10.68□□□□□ -0.7
HMGCL-201ENST00000235958 EYSQ5T1H1 3165 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 PATJQ8NI35 1801 aa10.68□□□□□ -0.7
HMGCL-201ENST00000235958 ZNF263O14978 683 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 LCA5LO95447 670 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 FGF19O95750 216 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 CALB1P05937 261 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 FYNP06241 537 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 PTMAP06454 111 aaKnown RBP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 FSHRP23945 695 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 CDC25CP30307 473 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 CYLC1P35663 651 aaPredicted RBP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 GALCP54803 685 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 RNASE9P60153 205 aaKnown RBP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 YWHAGP61981 247 aaKnown RBP eCLIP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 YWHAZP63104 245 aaKnown RBP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 TFF2Q03403 129 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 LEXMQ3ZCV2 418 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 EFHC1Q5JVL4 640 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 RAD9BQ6WBX8 426 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 HFE2Q6ZVN8 426 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 FAM183BPQ6ZVS7 135 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 ZDHHC17Q8IUH5 632 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 ARHGAP18Q8N392 663 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 PDZD8Q8NEN9 1154 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 ITFG1Q8TB96 612 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 OVCA2Q8WZ82 227 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 IRGQQ8WZA9 623 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 SUSD6Q92537 303 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 MCRS1Q96EZ8 462 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 CYP2S1Q96SQ9 504 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 C11orf70Q9BRQ4 267 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 SLC46A2Q9BY10 475 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 OSER1Q9NX31 292 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 WDR35Q9P2L0 1181 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 USP15Q9Y4E8 981 aaPredicted RBP10.67□□□□□ -0.7
HMGCL-201ENST00000235958 C5orf42Q9H799 3197 aa10.67□□□□□ -0.7
HMGCL-201ENST00000235958 NCANO14594 1321 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 DOCK8Q8NF50 2099 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 SIGLEC16A6NMB1 481 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 EIF3CLB5ME19 914 aaKnown RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 SART1O43290 800 aaKnown RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 MBTPS2O43462 519 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 TADA3O75528 432 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 GRAP2O75791 330 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 NDUFA10O95299 355 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 TBX18O95935 607 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 LTFP02788 710 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 GLI1P08151 1106 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 H2AFZP0C0S5 128 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 RARGP13631 454 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 HDCP19113 662 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 ABCB4P21439 1286 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 RRM1P23921 792 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 MAGEA1P43355 309 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 PSEN1P49768 467 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 GPC5P78333 572 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 SMAD4Q13485 552 aaKnown RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 SPA17Q15506 151 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 TEAD2Q15562 447 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 C10orf76Q5T2E6 689 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 HECTD3Q5T447 861 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 GPR158Q5T848 1215 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 BTBD8Q5XKL5 378 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 TXNDC8Q6A555 127 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 POTEHQ6S545 545 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 OLFML1Q6UWY5 402 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 H2AFVQ71UI9 128 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 ZNF276Q8N554 614 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 ING5Q8WYH8 240 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 EDEM1Q92611 657 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 MRPS31Q92665 395 aaKnown RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 FAM149B1Q96BN6 582 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 PIWIL1Q96J94 861 aaKnown RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 ZSWIM3Q96MP5 696 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 ZNF830Q96NB3 372 aaPredicted RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 NECTIN4Q96NY8 510 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 EIF3CQ99613 913 aaKnown RBP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 PACSIN1Q9BY11 444 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms