RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 CELF5Q8N6W0 485 aaKnown RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 DTWD2Q8NBA8 298 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 NKD2Q969F2 451 aaPredicted RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 NOX5Q96PH1 765 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 SPAG5Q96R06 1193 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 ERGIC2Q96RQ1 377 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 LRRC4Q9HBW1 653 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 TLR8Q9NR97 1041 aaKnown RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 THG1LQ9NWX6 298 aaKnown RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 CEP83Q9Y592 693 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 FAM92AA1XBS5 289 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 M0QYV0 167 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 THAP12O43422 761 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ABL1P00519 1130 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 CKMP06732 381 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 SRFP11831 508 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 HDCP19113 662 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 KRT9P35527 623 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 PLA2G4AP47712 749 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 TUBP50607 506 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 KIF11P52732 1056 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 USP46P62068 366 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF268Q14587 947 aaPredicted RBP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 DRAP1Q14919 205 aaPredicted RBP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 SYCP1Q15431 976 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 HECTD3Q5T447 861 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 SNX30Q5VWJ9 437 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 GJB7Q6PEY0 223 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 PARM1Q6UWI2 310 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 CACNA2D4Q7Z3S7 1137 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 LUZP1Q86V48 1076 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 SIX6OS1Q8N1H7 587 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 MAB21L3Q8N8X9 362 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ZMIZ2Q8NF64 920 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 KCTD13Q8WZ19 329 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 FGF14Q92915 247 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 HSFY1Q96LI6 401 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 TRMT61BQ9BVS5 477 aaKnown RBP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 NACA2Q9H009 215 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 SIX2Q9NPC8 291 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 FAM207AQ9NSI2 230 aaPredicted RBP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.88□□□□□ -0.51
SF3B6-201ENST00000233468 SCML2Q9UQR0 700 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 TSC2P49815 1807 aa11.88□□□□□ -0.51
SF3B6-201ENST00000233468 A0A1W2PQC6 194 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 RNF225M0QZC1 329 aaPredicted RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 FOXN3O00409 490 aaPredicted RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 CYP26A1O43174 497 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 SART1O43290 800 aaKnown RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 BEST1O76090 585 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 DCNP07585 359 aaKnown RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 RALAP11233 206 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 PSMC3P17980 439 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 BRD2P25440 801 aaKnown RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 STAT1P42224 750 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 ACADSBP45954 432 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 POLR2FP61218 127 aaKnown RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 PDE4CQ08493 712 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TANGO2Q6ICL3 276 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 CC2D1AQ6P1N0 951 aaPredicted RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 CCDC186Q7Z3E2 898 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TMEM150AQ86TG1 271 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TTC30AQ86WT1 665 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 MFSD6LQ8IWD5 586 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 KIAA1958Q8N8K9 716 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 GOLGA1Q92805 767 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 IRF7Q92985 503 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 IQCDQ96DY2 449 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 ZSWIM3Q96MP5 696 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 NAA15Q9BXJ9 866 aaKnown RBP11.87□□□□□ -0.51
SF3B6-201ENST00000233468 SLC46A2Q9BY10 475 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TBC1D17Q9HA65 648 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TDP1Q9NUW8 608 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 TMEM30AQ9NV96 361 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 WNT16Q9UBV4 365 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 SIK3Q9Y2K2 1263 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 FHOD1Q9Y613 1164 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 USP3Q9Y6I4 520 aa11.87□□□□□ -0.51
SF3B6-201ENST00000233468 A0A1B0GTH6 734 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 HEPACAM2A8MVW5 462 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 HHLA1C9JL84 531 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 TK2O00142 265 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms