RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 DNAJC24Q6P3W2 148 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CCBE1Q6UXH8 406 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ALKAL1Q6UXT8 129 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 HACE1Q8IYU2 909 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 LILRB2Q8N423 598 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 WDTC1Q8N5D0 677 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 LRRC52Q8N7C0 313 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 RNF169Q8NCN4 708 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 KLHDC9Q8NEP7 349 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 FEZF2Q8TBJ5 459 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 WHAMMQ8TF30 809 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 HNRNPLLQ8WVV9 542 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 C18orf8Q96DM3 657 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ELOVL4Q9GZR5 314 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 AGO3Q9H9G7 860 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 EPB41L5Q9HCM4 733 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 FAM105AQ9NUU6 356 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 TMEM59LQ9UK28 342 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 TSPAN16Q9UKR8 245 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF232Q9UNY5 417 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 PCDHA3Q9Y5H8 950 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 SNX5Q9Y5X3 404 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GRIN2DO15399 1336 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 KIAA0100Q14667 2235 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 A8MXQ7 604 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 KPNA7A9QM74 516 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 RAD51CO43502 376 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 HRO43593 1189 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 S1PR4O95977 384 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GLI1P08151 1106 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 STIP1P31948 543 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 MAP2K2P36507 400 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 MLH1P40692 756 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 SLC1A1P43005 524 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 TNNT3P45378 269 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 PEX5P50542 639 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 COPAP53621 1224 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 HSD17B7P56937 341 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 PTP4A2Q12974 167 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 SLMAPQ14BN4 828 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GLE1Q53GS7 698 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ODF2Q5BJF6 829 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 DENND1BQ6P3S1 775 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 MILR1Q7Z6M3 343 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ACOT1Q86TX2 421 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CCDC50Q8IVM0 306 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 TTC39CQ8N584 583 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ARRDC4Q8NCT1 418 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GABPB2Q8TAK5 448 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 UBA3Q8TBC4 463 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 IFT81Q8WYA0 676 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CD101Q93033 1021 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF560Q96MR9 790 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CPXM1Q96SM3 734 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GAD1Q99259 594 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 MRPL45Q9BRJ2 306 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 FAM167BQ9BTA0 163 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 C2orf49Q9BVC5 232 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 SENP6Q9GZR1 1112 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ETNK1Q9HBU6 452 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 FAM49BQ9NUQ9 324 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 TJP2Q9UDY2 1190 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CDV3Q9UKY7 258 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 STRIP2Q9ULQ0 834 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 NR2E1Q9Y466 385 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ERVH48-1M5A8F1 160 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 O00370 1275 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 PIK3R2O00459 728 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 HUS1O60921 280 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 SASH3O75995 380 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 MICAL2O94851 1124 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 PROSCO94903 275 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 INHAP05111 366 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 RPLP2P05387 115 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 MYBL2P10244 700 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 KRT3P12035 628 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 NEFHP12036 1026 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CST5P28325 142 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CD52P31358 61 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CDH5P33151 784 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CTNNA1P35221 906 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 TAF6P49848 677 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 ACLYP53396 1101 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 SOX4Q06945 474 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 INCA1Q0VD86 236 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 PAK2Q13177 524 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 HLTFQ14527 1009 aaKnown RBP eCLIP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 SMC1AQ14683 1233 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CNGA2Q16280 664 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 PPP1R26Q5T8A7 1209 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 MAP3K21Q5TCX8 1036 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CCNI2Q6ZMN8 369 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 HDXQ7Z353 690 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 IFT20Q8IY31 132 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 C3orf20Q8ND61 904 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 CCDC26Q8TAB7 109 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF296Q8WUU4 475 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 LPPQ93052 612 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms