RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 ITGA8P53708 1063 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 NKX3-2P78367 333 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 SMAD1Q15797 465 aaKnown RBP13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 NPNTQ6UXI9 565 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 HOOK3Q86VS8 718 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 RHOT1Q8IXI2 618 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 TRIM11Q96F44 468 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 OSBPL8Q9BZF1 889 aa13.59□□□□□ -0.23
PCDHB6-201ENST00000231136 C9IYK1 514 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 SGK1O00141 431 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PGFP49763 221 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PKDCCQ504Y2 493 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 ICE2Q659A1 982 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 EDEM1Q92611 657 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 CHST12Q9NRB3 414 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 INTS9Q9NV88 658 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 GDAP2Q9NXN4 497 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 NRP1O14786 923 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 CHN1P15882 459 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 POU5F1Q01860 360 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 DHX34Q14147 1143 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 CCDC14Q49A88 953 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PPP6R3Q5H9R7 873 aaPredicted RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PYROXD2Q8N2H3 581 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 SYT15Q9BQS2 421 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 GIT1Q9Y2X7 761 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 F5H423 210 aaPredicted RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 AMHP03971 560 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 USP17L7P0C7H9 530 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 CREB1P16220 341 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 ITGB8P26012 769 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 TNFRSF8P28908 595 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 LRPAP1P30533 357 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 SYPL2Q5VXT5 272 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 TTC9BQ8N6N2 239 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 MYCBPAPQ8TBZ2 947 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 VPS37BQ9H9H4 285 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
PCDHB6-201ENST00000231136 CES2O00748 559 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 CABYRO75952 493 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 GPR15P49685 360 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 FAM131BQ86XD5 332 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 SRRM1Q8IYB3 904 aaKnown RBP13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 FAM172AQ8WUF8 416 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 EPN3Q9H201 632 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 SCN5AQ14524 2016 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 GMNCA6NCL1 334 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 FAM187AA6NFU0 413 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 ENPP3O14638 875 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 AP1G2O75843 785 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 SELPP16109 830 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 NME3Q13232 169 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 QPCTQ16769 361 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 CLEC20AQ6ZU45 233 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 CCDC121Q6ZUS5 278 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 SLC24A5Q71RS6 500 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 MRPL10Q7Z7H8 261 aaKnown RBP13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 ANKRD52Q8NB46 1076 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 ZMIZ2Q8NF64 920 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 RUBCNQ92622 972 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 SMOQ99835 787 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 PAK6Q9NQU5 681 aaPredicted RBP13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 DNPEPQ9ULA0 475 aa13.57□□□□□ -0.24
PCDHB6-201ENST00000231136 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 CDK7P50613 346 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 SLC25A11Q02978 314 aaKnown RBP13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 P3H1Q32P28 736 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 GLB1LQ6UWU2 654 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 SLITRK1Q96PX8 696 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 NCAPGQ9BPX3 1015 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 CDC42EP4Q9H3Q1 356 aaKnown RBP13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 USP18Q9UMW8 372 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 PHF24Q9UPV7 400 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 C2CD4BA6NLJ0 364 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 C2CD2LO14523 706 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 ACRP10323 421 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 CYP2F1P24903 491 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 GPS1Q13098 491 aa13.56□□□□□ -0.24
PCDHB6-201ENST00000231136 PPP2R5EQ16537 467 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms