RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ST7Q9NRC1 585 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 GKN1Q9NS71 199 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 NAGPAQ9UK23 515 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 DAAM1Q9Y4D1 1078 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 MYO16Q9Y6X6 1858 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 MUC3AQ02505 3323 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 YJEFN3A6XGL0 299 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 E7ENQ6 273 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 MDM4O15151 490 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 OLFM2O95897 454 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 CKMP06732 381 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 RARGP13631 454 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 MFSD6LQ8IWD5 586 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 CELF5Q8N6W0 485 aaKnown RBP15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 NUP210Q8TEM1 1887 aaPredicted RBP15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 STK32AQ8WU08 396 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 CPLX3Q8WVH0 158 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 EDAQ92838 391 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 WBP2Q969T9 261 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 ZFYVE19Q96K21 471 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 HSFY1Q96LI6 401 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 CPXM1Q96SM3 734 aa15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.14■□□□□ 0.01
SUPT4H1-201ENST00000225504 DPYSL4O14531 572 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 TLR5O60602 858 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 PSMC3P17980 439 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 DAOAP59103 153 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 YWHAGP61981 247 aaKnown RBP eCLIP15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 SLC7A9P82251 487 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 MEA1Q16626 185 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 E4F1Q66K89 784 aaPredicted RBP15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 TMEM110Q86TL2 294 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 SIX6OS1Q8N1H7 587 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 C1orf131Q8NDD1 294 aaKnown RBP15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 SH3RF2Q8TEC5 729 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 ZFRQ96KR1 1074 aaKnown RBP15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 TRMT61BQ9BVS5 477 aaKnown RBP15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 ZMYM5Q9UJ78 669 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 DUSP12Q9UNI6 340 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 CPQQ9Y646 472 aa15.13■□□□□ 0.01
SUPT4H1-201ENST00000225504 CUL9Q8IWT3 2517 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 E5RJQ4 531 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 SCAMP3O14828 347 aaKnown RBP15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 PAPSS1O43252 624 aaPredicted RBP15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 MBL2P11226 248 aaPredicted RBP15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 SRFP11831 508 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 ALADP13716 330 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 GDI1P31150 447 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 PDE6CP51160 858 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 PLCB2Q00722 1185 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 FMO1Q01740 532 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 CDR2Q01850 454 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 PDCLQ13371 301 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 ZNF268Q14587 947 aaPredicted RBP15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 BSPRYQ5W0U4 402 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 SCML4Q8N228 414 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 BPIFB1Q8TDL5 484 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 CPA5Q8WXQ8 436 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 EDEM1Q92611 657 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 E2F7Q96AV8 911 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 PDCL3Q9H2J4 239 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 CNGB3Q9NQW8 809 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
SUPT4H1-201ENST00000225504 LEFTY2O00292 366 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 FYNP06241 537 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 PFKLP17858 780 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 CDH5P33151 784 aaPredicted RBP15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 TUBP50607 506 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 FCHO2Q0JRZ9 810 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 TAF5Q15542 800 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 C2CD6Q53TS8 623 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 FIGNQ5HY92 759 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 C10orf120Q5SQS8 335 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 UBALD2Q8IYN6 164 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 OLIG1Q8TAK6 271 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 ASIC4Q96FT7 647 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 PIWIL1Q96J94 861 aaKnown RBP15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 KLF16Q9BXK1 252 aaPredicted RBP15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 EDEM3Q9BZQ6 932 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 LINC00597Q9H2U6 94 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 SLC2A4RGQ9NR83 387 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 OBP2AQ9NY56 170 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 CLIC5Q9NZA1 410 aa15.11■□□□□ 0.01
SUPT4H1-201ENST00000225504 ARNTLO00327 626 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 ERBB2P04626 1255 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 SKILP12757 684 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 FERP16591 822 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 ATP5C1P36542 298 aaKnown RBP15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 ACADSBP45954 432 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 PSEN1P49768 467 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 TNK2Q07912 1038 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 ZNF77Q15935 545 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 PTPN20Q4JDL3 420 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 NAA35Q5VZE5 725 aa15.1■□□□□ 0.01
SUPT4H1-201ENST00000225504 TRIM67Q6ZTA4 783 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms