RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ZNF571Q7Z3V5 609 aaPredicted RBP24.83■■□□□ 1.57
HOMER3-201ENST00000221222 MON1AQ86VX9 555 aa24.83■■□□□ 1.57
HOMER3-201ENST00000221222 PPP1R13BQ96KQ4 1090 aa24.83■■□□□ 1.57
HOMER3-201ENST00000221222 PCDHB18PQ96TA0 734 aa24.83■■□□□ 1.57
HOMER3-201ENST00000221222 TLR8Q9NR97 1041 aaKnown RBP24.83■■□□□ 1.57
HOMER3-201ENST00000221222 ABHD10Q9NUJ1 306 aa24.83■■□□□ 1.57
HOMER3-201ENST00000221222 EPS15L1Q9UBC2 864 aa24.83■■□□□ 1.57
HOMER3-201ENST00000221222 CHORDC1Q9UHD1 332 aaPredicted RBP24.83■■□□□ 1.57
HOMER3-201ENST00000221222 AKR1B15C9JRZ8 316 aaPredicted RBP24.82■■□□□ 1.56
HOMER3-201ENST00000221222 E5RJQ4 531 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 FBXO21O94952 628 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 SKILP12757 684 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 UNGP13051 313 aaPredicted RBP24.82■■□□□ 1.56
HOMER3-201ENST00000221222 LAMP2P13473 410 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 PSEN1P49768 467 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 DAOAP59103 153 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 PTPN20Q4JDL3 420 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 STXBP5Q5T5C0 1151 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 GPR158Q5T848 1215 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.82■■□□□ 1.56
HOMER3-201ENST00000221222 TDRD5Q8NAT2 981 aaKnown RBP24.82■■□□□ 1.56
HOMER3-201ENST00000221222 IRGQQ8WZA9 623 aa24.82■■□□□ 1.56
HOMER3-201ENST00000221222 C2CD4DB7Z1M9 353 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 LOC730098B7Z3J9 87 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 PFKLP17858 780 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 TUBP50607 506 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 ADKP55263 362 aaKnown RBP24.81■■□□□ 1.56
HOMER3-201ENST00000221222 SNX16P57768 344 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 CLEC16AQ2KHT3 1053 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 NAA35Q5VZE5 725 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 TXNDC8Q6A555 127 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 SCD5Q86SK9 330 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 ZDHHC14Q8IZN3 488 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 ARHGAP18Q8N392 663 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 MCRS1Q96EZ8 462 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 RPGRIP1Q96KN7 1286 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 ZSWIM3Q96MP5 696 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 SLC46A2Q9BY10 475 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 MUC6Q6W4X9 2439 aa24.81■■□□□ 1.56
HOMER3-201ENST00000221222 PIK3R2O00459 728 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 PAPSS1O43252 624 aaPredicted RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 TNFAIP3P21580 790 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 WEE1P30291 646 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 GABRB2P47870 512 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 PGFP49763 221 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 CENPCQ03188 943 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 GOLGA8FQ08AF8 430 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 GOLGA8DPQ0D2H9 430 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 WDR59Q6PJI9 974 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 SCUBE3Q8IX30 993 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 PLCD3Q8N3E9 789 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 IPO4Q8TEX9 1081 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 CPA5Q8WXQ8 436 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 SLITRK6Q9H5Y7 841 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 NMUR1Q9HB89 426 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 TJP2Q9UDY2 1190 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 A0A1W2PQH9 124 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 SART1O43290 800 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 OAS1P00973 400 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 SP100P23497 879 aaPredicted RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 TSR1Q2NL82 804 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 TDRD12Q587J7 1177 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 ERICH1Q86X53 443 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 ZNF276Q8N554 614 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 MAB21L3Q8N8X9 362 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 TC2NQ8N9U0 490 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 MSANTD4Q8NCY6 345 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 SLC30A5Q8TAD4 765 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 MIS12Q9H081 205 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 SEPT11Q9NVA2 429 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 ZNHIT6Q9NWK9 470 aaKnown RBP24.8■■□□□ 1.56
HOMER3-201ENST00000221222 OSER1Q9NX31 292 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 CLIC5Q9NZA1 410 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 ARHGAP20Q9P2F6 1191 aa24.8■■□□□ 1.56
HOMER3-201ENST00000221222 HELZP42694 1942 aaKnown RBP24.79■■□□□ 1.56
HOMER3-201ENST00000221222 C2orf78A6NCI8 922 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 YJEFN3A6XGL0 299 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 E7ENQ6 273 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 OLFM2O95897 454 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 ABL1P00519 1130 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 ERBB2P04626 1255 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 MMP8P22894 467 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 YWHAGP61981 247 aaKnown RBP eCLIP24.79■■□□□ 1.56
HOMER3-201ENST00000221222 HECTD3Q5T447 861 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 CMTM8Q8IZV2 173 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 ZSCAN18Q8TBC5 510 aaPredicted RBP24.79■■□□□ 1.56
HOMER3-201ENST00000221222 CLEC4CQ8WTT0 213 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 NDRG1Q92597 394 aaKnown RBP24.79■■□□□ 1.56
HOMER3-201ENST00000221222 ASB16Q96NS5 453 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 SYNCQ9H7C4 482 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 TRPV4Q9HBA0 871 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 IMPACTQ9P2X3 320 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 NAGPAQ9UK23 515 aa24.79■■□□□ 1.56
HOMER3-201ENST00000221222 TRIOO75962 3097 aa24.78■■□□□ 1.56
HOMER3-201ENST00000221222 TECTAO75443 2155 aa24.78■■□□□ 1.56
HOMER3-201ENST00000221222 DDX3XO00571 662 aaKnown RBP eCLIP24.78■■□□□ 1.56
HOMER3-201ENST00000221222 PLEKP08567 350 aaPredicted RBP24.78■■□□□ 1.56
HOMER3-201ENST00000221222 NSFP46459 744 aaKnown RBP24.78■■□□□ 1.56
HOMER3-201ENST00000221222 FAM78AQ5JUQ0 283 aa24.78■■□□□ 1.56
HOMER3-201ENST00000221222 PPP1R2P3Q6NXS1 205 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms