RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PDHA1P08559 390 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 TUFMP49411 452 aaKnown RBP19.57■□□□□ 0.72
SMPD3-201ENST00000219334 CNGA3Q16281 694 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 HOMEZQ8IX15 550 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 ECSITQ9BQ95 431 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 FICDQ9BVA6 458 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 ASB7Q9H672 318 aa19.57■□□□□ 0.72
SMPD3-201ENST00000219334 NCAM2O15394 837 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 IRAK1BP1Q5VVH5 260 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 BLOC1S6Q9UL45 172 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 PLAGL2Q9UPG8 496 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 USP15Q9Y4E8 981 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-201ENST00000219334 VIL1P09327 827 aaKnown RBP19.56■□□□□ 0.72
SMPD3-201ENST00000219334 IMPDH2P12268 514 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 HNRNPH2P55795 449 aaKnown RBP19.56■□□□□ 0.72
SMPD3-201ENST00000219334 FKBP1CQ5VVH2 108 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 IGFLR1Q9H665 355 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 IL1RL2Q9HB29 575 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 SYTL2Q9HCH5 934 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 ZMYM2Q9UBW7 1377 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 GSNP06396 782 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 YWHAQP27348 245 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 NUMBP49757 651 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 CCZ1BP86790 482 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 CCZ1P86791 482 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-201ENST00000219334 FAM9CQ8IZT9 166 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 ARMC2Q8NEN0 867 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 ISCUQ9H1K1 167 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 MANSC1Q9H8J5 431 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 TMEM120BA0PK00 339 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 TERF2Q15554 542 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 SV2AQ7L0J3 742 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 TUBGCP3Q96CW5 907 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 ILKAPQ9H0C8 392 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-201ENST00000219334 RAD18Q9NS91 495 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 SMPD4Q9NXE4 827 aa19.56■□□□□ 0.72
SMPD3-201ENST00000219334 MAPTP10636 758 aaKnown RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SEC23AQ15436 765 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 DSG4Q86SJ6 1040 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 KAT2BQ92831 832 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 EME1Q96AY2 570 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SMARCD1Q96GM5 515 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 IDI2Q9BXS1 227 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 RTN3O95197 1032 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 MAGEA9P43362 315 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 OTUD4Q01804 1114 aaKnown RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 MARC1Q5VT66 337 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 ILDR2Q71H61 639 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 NIPA1Q7RTP0 329 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 VIPAS39Q9H9C1 493 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 ZW10O43264 779 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 GLRA3O75311 464 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 GLP2RO95838 553 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 HPGDP15428 266 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SOX10P56693 466 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 DACT2Q5SW24 774 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SENP6Q9GZR1 1112 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 TBC1D13Q9NVG8 400 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 GGT7Q9UJ14 662 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 NCF1BA6NI72 391 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 NCF1CA8MVU1 366 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SERPINF2P08697 491 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 NCF1P14598 390 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 DMTNQ08495 405 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 LAYNQ6UX15 382 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 MAGEB10Q96LZ2 347 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 KBTBD4Q9NVX7 518 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 NCKAP1Q9Y2A7 1128 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 A0A087X0T9 212 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 RAMP2O60895 175 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 FAM228BP0C875 321 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 GUCA1AP43080 201 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SERPINB8P50452 374 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 PPIL2Q13356 520 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 CYTH1Q15438 398 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 CCDC33Q8N5R6 958 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 FAR2Q96K12 515 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 PGLYRP2Q96PD5 576 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 THUMPD3Q9BV44 507 aaKnown RBP19.55■□□□□ 0.72
SMPD3-201ENST00000219334 SNCAIPQ9Y6H5 919 aa19.55■□□□□ 0.72
SMPD3-201ENST00000219334 FAM47E-STBD1D6RA91 191 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ACKR2O00590 384 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 KRT8P05787 483 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ADCYAP1R1P41586 468 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 FKBP1AP62942 108 aaKnown RBP19.54■□□□□ 0.72
SMPD3-201ENST00000219334 MCL1Q07820 350 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 RPAINQ86UA6 219 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 OR2W6PQ8NHA6 318 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 EDEM1Q92611 657 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ZNF333Q96JL9 665 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 MFSD1Q9H3U5 465 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 MSRAQ9UJ68 235 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 AGLP35573 1532 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 RRM1P23921 792 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ACAT1P24752 427 aaKnown RBP19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ADGRA1Q86SQ6 560 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 SH2D3CQ8N5H7 860 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ZNF614Q8N883 585 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 TSC22D3Q99576 134 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 DMAP1Q9NPF5 467 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms