RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 OVCA2Q8WZ82 227 aa23.41■■□□□ 1.34
VTI1B-201ENST00000216456 ARID3AQ99856 593 aa23.41■■□□□ 1.34
VTI1B-201ENST00000216456 NMUR1Q9HB89 426 aa23.41■■□□□ 1.34
VTI1B-201ENST00000216456 ATP6V1DQ9Y5K8 247 aa23.41■■□□□ 1.34
VTI1B-201ENST00000216456 PRR5-ARHGAP8B1AHC4 643 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 KIF20AO95235 890 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 FAM200BP0CF97 657 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 PMS1P54277 932 aaKnown RBP23.4■■□□□ 1.34
VTI1B-201ENST00000216456 ARHGAP8P85298 464 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 CSRP2Q16527 193 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 CACNA2D4Q7Z3S7 1137 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 FMR1NBQ8N0W7 255 aaPredicted RBP23.4■■□□□ 1.34
VTI1B-201ENST00000216456 CAMKK1Q8N5S9 505 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 CYFIP2Q96F07 1278 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 NIF3L1Q9GZT8 377 aa23.4■■□□□ 1.34
VTI1B-201ENST00000216456 CCDC163A0A0D9SF12 145 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 TLR5O60602 858 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 CILPO75339 1184 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 APBB3O95704 486 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 ADH5P11766 374 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 TIE1P35590 1138 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 PRCPP42785 496 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 DGKEP52429 567 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 PLK5Q496M5 336 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 TMEM92Q6UXU6 159 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 TMEM25Q86YD3 366 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 ALLCQ8N6M5 410 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 ACDQ96AP0 544 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 HNRNPABQ99729 332 aaKnown RBP23.39■■□□□ 1.33
VTI1B-201ENST00000216456 NT5C1AQ9BXI3 368 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 DUSP15Q9H1R2 295 aaPredicted RBP23.39■■□□□ 1.33
VTI1B-201ENST00000216456 TMEM8AQ9HCN3 771 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 SH3BP1Q9Y3L3 701 aa23.39■■□□□ 1.33
VTI1B-201ENST00000216456 E2F8A0AVK6 867 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 SLC9A3R1O14745 358 aaPredicted RBP23.38■■□□□ 1.33
VTI1B-201ENST00000216456 GREM1O60565 184 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 KAT7O95251 611 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 ACO1P21399 889 aaKnown RBP23.38■■□□□ 1.33
VTI1B-201ENST00000216456 RPL13P26373 211 aaKnown RBP23.38■■□□□ 1.33
VTI1B-201ENST00000216456 PPP1R26Q5T8A7 1209 aaPredicted RBP23.38■■□□□ 1.33
VTI1B-201ENST00000216456 TCEAL6Q6IPX3 200 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 ANO7Q6IWH7 933 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 TTC30AQ86WT1 665 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 PHTF2Q8N3S3 785 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 TSTD1Q8NFU3 115 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 TATDN2Q93075 761 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 TCEAL3Q969E4 200 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 EXOC4Q96A65 974 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 PNKPQ96T60 521 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 IMPG2Q9BZV3 1241 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 NACA2Q9H009 215 aa23.38■■□□□ 1.33
VTI1B-201ENST00000216456 RALGAPA1Q6GYQ0 2036 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 A0A1W2PQH9 124 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 TRIM49BA6NDI0 452 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 SGK1O00141 431 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 LRP3O75074 770 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 EPN2O95208 641 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 DDX42Q86XP3 938 aaKnown RBP eCLIP23.37■■□□□ 1.33
VTI1B-201ENST00000216456 IL17RCQ8NAC3 791 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 TXNDC5Q8NBS9 432 aaKnown RBP23.37■■□□□ 1.33
VTI1B-201ENST00000216456 P2RY11Q96G91 374 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 KLF16Q9BXK1 252 aaPredicted RBP23.37■■□□□ 1.33
VTI1B-201ENST00000216456 CYP3A43Q9HB55 503 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 ARHGEF4Q9NR80 690 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 MYH10P35580 1976 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 LAMA1P25391 3075 aa23.37■■□□□ 1.33
VTI1B-201ENST00000216456 KLF8O95600 359 aaPredicted RBP23.36■■□□□ 1.33
VTI1B-201ENST00000216456 ADH1CP00326 375 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 BCKDHBP21953 392 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 TUBP50607 506 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 EDRF1Q3B7T1 1238 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 CBWD6Q4V339 395 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 CBWD3Q5JTY5 395 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 CBWD5Q5RIA9 395 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 KRT39Q6A163 491 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 ISM2Q6H9L7 571 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 SCD5Q86SK9 330 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 FRMD1Q8N878 549 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 ENGASEQ8NFI3 743 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 MDGA1Q8NFP4 955 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 ERLEC1Q96DZ1 483 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 COMMD8Q9NX08 183 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 TBC1D14Q9P2M4 693 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 HCN2Q9UL51 889 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 MMP17Q9ULZ9 603 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 SCML2Q9UQR0 700 aa23.36■■□□□ 1.33
VTI1B-201ENST00000216456 KIR2DL1P43626 348 aaPredicted RBP23.35■■□□□ 1.33
VTI1B-201ENST00000216456 MXI1P50539 228 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 ANO4Q32M45 955 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 ANKRD40Q6AI12 368 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 ETFBKMTQ8IXQ9 262 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 NETO1Q8TDF5 533 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 ZC3H10Q96K80 434 aaKnown RBP23.35■■□□□ 1.33
VTI1B-201ENST00000216456 RTKNQ9BST9 563 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 FBXO44Q9H4M3 255 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 TLR8Q9NR97 1041 aaKnown RBP23.35■■□□□ 1.33
VTI1B-201ENST00000216456 SPHK2Q9NRA0 654 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 EBF1Q9UH73 591 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 PCDHA5Q9Y5H7 936 aa23.35■■□□□ 1.33
VTI1B-201ENST00000216456 SPAG17Q6Q759 2223 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms