RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 TMEM176AQ96HP8 235 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 PARK7Q99497 189 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 HERPUD2Q9BSE4 406 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 TINF2Q9BSI4 451 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 NACA2Q9H009 215 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 PCMTD2Q9NV79 361 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 MARCOQ9UEW3 520 aaPredicted RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 COL4A5P29400 1685 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 MIPP30301 263 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 GNL1P36915 607 aaPredicted RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 CCNFP41002 786 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 CRADDP78560 199 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 MCL1Q07820 350 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 OVGP1Q12889 678 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 FASTKD3Q14CZ7 662 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 KCTD17Q8N5Z5 321 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 FAM172AQ8WUF8 416 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 BHMTQ93088 406 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 GAD1Q99259 594 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 DNAAF2Q9NVR5 837 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 ASNSD1Q9NWL6 643 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 AVILO75366 819 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 ASS1P00966 412 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 F7P08709 466 aaPredicted RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 ABCG1P45844 678 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 PPIL2Q13356 520 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 CES3Q6UWW8 571 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 SPOCD1Q6ZMY3 1216 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 C3orf62Q6ZUJ4 267 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 HIPK4Q8NE63 616 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 SCG3Q8WXD2 468 aaKnown RBP13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 ARAP2Q8WZ64 1704 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 ARHGAP42A6NI28 874 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MSCO60682 206 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 SMPD1P17405 629 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 GTF2A2P52657 109 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 B3GNT9Q6UX72 402 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 DEPDC1BQ8WUY9 529 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 ZNF317Q96PQ6 595 aaPredicted RBP13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 DCLK3Q9C098 648 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 UNKQ9C0B0 810 aaKnown RBP13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 TRABDQ9H4I3 376 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 COMMD10Q9Y6G5 202 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 SRRM3A6NNA2 597 aaPredicted RBP13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 H0YGN5 161 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 AGTP01019 485 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 IQCF3P0C7M6 154 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 ARL4AP40617 200 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 SPARCL1Q14515 664 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 NFIL3Q16649 462 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 HIF1AQ16665 826 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 LGSNQ5TDP6 509 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 TRIM72Q6ZMU5 477 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 SLC2A14Q8TDB8 520 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 PPP1R36Q96LQ0 422 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MAGEB5Q9BZ81 275 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 RXFP1Q9HBX9 757 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 XPO7Q9UIA9 1087 aaKnown RBP13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 FIS1Q9Y3D6 152 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 NFS1Q9Y697 457 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 NFASCO94856 1347 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 A6NHS1 94 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MAPK13O15264 365 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MAGEB2O15479 319 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 ATP9BO43861 1147 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 USP12O75317 370 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 ITIH2P19823 946 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 CPA2P48052 419 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 ARL4CP56559 192 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MAP3K7CLP57077 242 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 SPATA24Q86W54 205 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 HACE1Q8IYU2 909 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 MYLK2Q9H1R3 596 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 CXCL16Q9H2A7 254 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 USP18Q9UMW8 372 aa13.43□□□□□ -0.26
PCDHB4-201ENST00000194152 GYG2O15488 501 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 GAD2Q05329 585 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 MDH1BQ5I0G3 518 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 ZDHHC14Q8IZN3 488 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 APPL2Q8NEU8 664 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 DPEP3Q9H4B8 488 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 ELNP15502 786 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 GJA5P36382 358 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 USP46P62068 366 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 TAF12Q16514 161 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 ZPBP2Q6X784 338 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 CLEC4CQ8WTT0 213 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 PGLYRP2Q96PD5 576 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 NMRK1Q9NWW6 199 aa13.42□□□□□ -0.26
PCDHB4-201ENST00000194152 LNPEPQ9UIQ6 1025 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms