RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 FAXCQ5TGI0 409 aa23.94■■□□□ 1.42
TARBP1-201ENST00000040877 LONP2Q86WA8 852 aa23.94■■□□□ 1.42
TARBP1-201ENST00000040877 RIOX2Q8IUF8 465 aa23.94■■□□□ 1.42
TARBP1-201ENST00000040877 CYP2W1Q8TAV3 490 aa23.94■■□□□ 1.42
TARBP1-201ENST00000040877 RIN2Q8WYP3 895 aaPredicted RBP23.94■■□□□ 1.42
TARBP1-201ENST00000040877 SLC24A2Q9UI40 661 aa23.94■■□□□ 1.42
TARBP1-201ENST00000040877 IPPQ9Y573 584 aa23.94■■□□□ 1.42
TARBP1-201ENST00000040877 MAGEB16A2A368 324 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 RNASEH1O60930 286 aaKnown RBP23.93■■□□□ 1.42
TARBP1-201ENST00000040877 MKRN4PQ13434 485 aaPredicted RBP23.93■■□□□ 1.42
TARBP1-201ENST00000040877 DNAJB3Q8WWF6 145 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 SLC35C1Q96A29 364 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 SH3GL3Q99963 347 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 ADGRE3Q9BY15 652 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 SUFUQ9UMX1 484 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 PTPN7P35236 360 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 MAP1SQ66K74 1059 aaPredicted RBP23.93■■□□□ 1.42
TARBP1-201ENST00000040877 NUP93Q8N1F7 819 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 BLOC1S6Q9UL45 172 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 CES2O00748 559 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 FLOT2Q14254 428 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 STX19Q8N4C7 294 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 ZNF556Q9HAH1 456 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 PCDH9Q9HC56 1237 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 SYTL2Q9HCH5 934 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 SYNDIG1LA6NDD5 238 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 PSEN2P49810 448 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 ACAP1Q15027 740 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 KDM7AQ6ZMT4 941 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 TMEM134Q9H6X4 195 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 TSPAN16Q9UKR8 245 aa23.93■■□□□ 1.42
TARBP1-201ENST00000040877 EIF4E1BA6NMX2 242 aaKnown RBP23.92■■□□□ 1.42
TARBP1-201ENST00000040877 IRAK1P51617 712 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 SKOR1P84550 965 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 PAN2Q504Q3 1202 aaKnown RBP23.92■■□□□ 1.42
TARBP1-201ENST00000040877 AVENQ9NQS1 362 aaPredicted RBP23.92■■□□□ 1.42
TARBP1-201ENST00000040877 TTLL13PA6NNM8 815 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 B2RBV5 119 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 IGF2BP3O00425 579 aaKnown RBP eCLIP23.92■■□□□ 1.42
TARBP1-201ENST00000040877 AVPR1AP37288 418 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 ACVR2BQ13705 512 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 ERMARDQ5T6L9 678 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 SMARCD1Q96GM5 515 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 LACRTQ9GZZ8 138 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 UMODL1Q5DID0 1318 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 RENBPP51606 427 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 PTGISQ16647 500 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 LZTR1Q8N653 840 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 CDCA5Q96FF9 252 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 NSL1Q96IY1 281 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 XPNPEP3Q9NQH7 507 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 VPS28Q9UK41 221 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 TBC1D12O60347 775 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 NDST1P52848 882 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 LRRC8BQ6P9F7 803 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 NLRP9Q7RTR0 991 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 SLC26A11Q86WA9 606 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 PRDM16Q9HAZ2 1276 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 TRPV2Q9Y5S1 764 aa23.92■■□□□ 1.42
TARBP1-201ENST00000040877 ADGRA2Q96PE1 1338 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 AIM2O14862 343 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 AKAP10O43572 662 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 NPM3O75607 178 aaKnown RBP23.91■■□□□ 1.42
TARBP1-201ENST00000040877 AMPD2Q01433 879 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 ZNF284Q2VY69 593 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 DUSP10Q9Y6W6 482 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 CCT8L1PA6NM43 557 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 RHOAP61586 193 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 EIF2B5Q13144 721 aaKnown RBP23.91■■□□□ 1.42
TARBP1-201ENST00000040877 MTMR9Q96QG7 549 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 CCDC134Q9H6E4 229 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 OSGEPQ9NPF4 335 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 CDV3Q9UKY7 258 aaKnown RBP23.91■■□□□ 1.42
TARBP1-201ENST00000040877 SHOC2Q9UQ13 582 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 KIF1AQ12756 1690 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 PIK3CDO00329 1044 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 CABYRO75952 493 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 RBP1P09455 135 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 C2CD6Q53TS8 623 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 DDI1Q8WTU0 396 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 TATDN2Q93075 761 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 GLIS2Q9BZE0 524 aaPredicted RBP23.91■■□□□ 1.42
TARBP1-201ENST00000040877 GPATCH2LQ9NWQ4 482 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 EIF3LQ9Y262 564 aaKnown RBP23.91■■□□□ 1.42
TARBP1-201ENST00000040877 CARNMT1Q8N4J0 409 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 ELOVL4Q9GZR5 314 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 BLOC1S4Q9NUP1 217 aa23.91■■□□□ 1.42
TARBP1-201ENST00000040877 ADGRB2O60241 1585 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 CASTOR2A6NHX0 329 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 RHBDL3P58872 404 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 EARS2Q5JPH6 523 aaKnown RBP23.9■■□□□ 1.42
TARBP1-201ENST00000040877 RETSATQ6NUM9 610 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 ARID3BQ8IVW6 561 aaPredicted RBP23.9■■□□□ 1.42
TARBP1-201ENST00000040877 RFWD2Q8NHY2 731 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 CLPBQ9H078 707 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 KCTD10Q9H3F6 313 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 MTM1Q13496 603 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 PCBP1Q15365 356 aaKnown RBP eCLIP23.9■■□□□ 1.42
TARBP1-201ENST00000040877 RASSF10A6NK89 507 aa23.9■■□□□ 1.42
TARBP1-201ENST00000040877 CYP2F1P24903 491 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms