RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 PIK3R5Q8WYR1 880 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 KCTD13Q8WZ19 329 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 ZIM3Q96PE6 472 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 FAM107BQ9H098 131 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 MTRRQ9UBK8 725 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 BHMG1C9JSJ3 638 aaPredicted RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 ADAM12O43184 909 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 FGF18O76093 207 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 HSPA9P38646 679 aaKnown RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 RNASE9P60153 205 aaKnown RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 SHHQ15465 462 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 TAF5Q15542 800 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 GPRIN1Q7Z2K8 1008 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 EMC1Q8N766 993 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 ATAD1Q8NBU5 361 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 FBXO22Q8NEZ5 403 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 HERC2P3Q9BVR0 1158 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 LRRC4Q9HBW1 653 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 DMAP1Q9NPF5 467 aaPredicted RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 GRXCR1A8MXD5 290 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 HHLA1C9JL84 531 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 F8VP50 259 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 GRAP2O75791 330 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 NDUFV1P49821 464 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 IRAK1P51617 712 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 MRPS25P82663 173 aaKnown RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 SLC6A3Q01959 620 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 OGDHQ02218 1023 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 DSG1Q02413 1049 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 SRLQ86TD4 932 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 KLHL7Q8IXQ5 586 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 VPS52Q8N1B4 723 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 NDRG1Q92597 394 aaKnown RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 CD101Q93033 1021 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 RNPC3Q96LT9 517 aaKnown RBP23.07■■□□□ 1.28
HOXC8-201ENST00000040584 PCDHB5Q9Y5E4 795 aa23.07■■□□□ 1.28
HOXC8-201ENST00000040584 CEP290O15078 2479 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 PTPRDP23468 1912 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 KRIT1O00522 736 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 PROSCO94903 275 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 GRIK1P39086 918 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 GLUD2P49448 558 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 KRT17Q04695 432 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 GPR17Q13304 367 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 FAM109BQ6ICB4 259 aaPredicted RBP23.06■■□□□ 1.28
HOXC8-201ENST00000040584 RNF19BQ6ZMZ0 732 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 ZDHHC17Q8IUH5 632 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 KLHL23Q8NBE8 558 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 OXCT2Q9BYC2 517 aaPredicted RBP23.06■■□□□ 1.28
HOXC8-201ENST00000040584 BACE2Q9Y5Z0 518 aa23.06■■□□□ 1.28
HOXC8-201ENST00000040584 SART1O43290 800 aaKnown RBP23.05■■□□□ 1.28
HOXC8-201ENST00000040584 MYOGP15173 224 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 DNAJB2P25686 324 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 TKTL1P51854 596 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 ZNF252P-AS1Q0IIN9 211 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 DAB2IPQ5VWQ8 1189 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 SLC8B1Q6J4K2 584 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 SCN4BQ8IWT1 228 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 SIX6OS1Q8N1H7 587 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 TTC9BQ8N6N2 239 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 AUTS2Q8WXX7 1259 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 KHSRPQ92945 711 aaKnown RBP eCLIP23.05■■□□□ 1.28
HOXC8-201ENST00000040584 FUBP3Q96I24 572 aaKnown RBP eCLIP23.05■■□□□ 1.28
HOXC8-201ENST00000040584 IP6K2Q9UHH9 426 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 LCMT1Q9UIC8 334 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 DDX3YO15523 660 aaKnown RBP23.05■■□□□ 1.28
HOXC8-201ENST00000040584 OR1D2P34982 312 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 SLC1A1P43005 524 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 ADCY1Q08828 1119 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 MTMR3Q13615 1198 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 DNAJC21Q5F1R6 531 aaKnown RBP23.05■■□□□ 1.28
HOXC8-201ENST00000040584 RAB41Q5JT25 222 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 ZBTB9Q96C00 473 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 CLSTN3Q9BQT9 956 aa23.05■■□□□ 1.28
HOXC8-201ENST00000040584 RRP15Q9Y3B9 282 aaKnown RBP23.05■■□□□ 1.28
HOXC8-201ENST00000040584 MTMR11A4FU01 709 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 MIF4GDA9UHW6 222 aaKnown RBP23.04■■□□□ 1.28
HOXC8-201ENST00000040584 HMGB1P1B2RPK0 211 aaPredicted RBP23.04■■□□□ 1.28
HOXC8-201ENST00000040584 SPOPO43791 374 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 VNN2O95498 520 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 URODP06132 367 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 MAN1A1P33908 653 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 FNIP1Q8TF40 1166 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 FAM114A2Q9NRY5 505 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 SLC27A5Q9Y2P5 690 aa23.04■■□□□ 1.28
HOXC8-201ENST00000040584 WDR27A2RRH5 827 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 LINC01553A4QN01 128 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 GOLGA6L10A6NI86 522 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 FAM153BP0C7A2 387 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 GPR15P49685 360 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 ROR1Q01973 937 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 DDR2Q16832 855 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 FAM153CQ494X1 144 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 TRNP1Q6NT89 227 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 ULBP1Q9BZM6 244 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 CARD9Q9H257 536 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 CRISPLD1Q9H336 500 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 FAM153AQ9UHL3 310 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 USTQ9Y2C2 406 aa23.03■■□□□ 1.28
HOXC8-201ENST00000040584 RANBP2P49792 3224 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms