RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MRPL45Q9BRJ2 306 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 KIF9Q9HAQ2 790 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 DDX56Q9NY93 547 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 TNFSF13BQ9Y275 285 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 DOCK2Q92608 1830 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 LOC100653049A0A140TA62 436 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TSPAN1O60635 241 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 KRT34O76011 436 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 ALDH1A1P00352 501 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TAF5Q15542 800 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 CES3Q6UWW8 571 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 SPOCD1Q6ZMY3 1216 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 SHC3Q92529 594 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 FAM136AQ96C01 138 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 ERLEC1Q96DZ1 483 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TTC25Q96NG3 672 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 ABCF3Q9NUQ8 709 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 COL24A1Q17RW2 1714 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TRIM49D1C9J1S8 452 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 GIPC1O14908 333 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 GPC4O75487 556 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 KRT38O76015 456 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 NPNTQ6UXI9 565 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 CRLF3Q8IUI8 442 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 FAM71AQ8IYT1 594 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 PCSK9Q8NBP7 692 aaKnown RBP12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TFAP2BQ92481 460 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 HDAC11Q96DB2 347 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 DCLK3Q9C098 648 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 ARL2BPQ9Y2Y0 163 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 PCDHA3Q9Y5H8 950 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 HSPA4LO95757 839 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TTC4O95801 387 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 INHAP05111 366 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 MCF2P10911 925 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 GRK4P32298 578 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 KLHL38Q2WGJ6 581 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 MMEL1Q495T6 779 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 SLC9A9Q8IVB4 645 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 FAM172AQ8WUF8 416 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 SGF29Q96ES7 293 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 MFSD14AQ96MC6 490 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 ZFATQ9P243 1243 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 HAO1Q9UJM8 370 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 PADI3Q9ULW8 664 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 O00370 1275 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 MICAL2O94851 1124 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 VNN1O95497 513 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 DARSP14868 501 aaKnown RBP12.54□□□□□ -0.4
CHPF2-201ENST00000035307 GPD1P21695 349 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 GARSP41250 739 aaKnown RBP12.54□□□□□ -0.4
CHPF2-201ENST00000035307 GRB14Q14449 540 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TFDP3Q5H9I0 405 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 NDUFAF2Q8N183 169 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 URGCPQ8TCY9 931 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 SKA2Q8WVK7 121 aaPredicted RBP12.54□□□□□ -0.4
CHPF2-201ENST00000035307 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 TMEM134Q9H6X4 195 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
CHPF2-201ENST00000035307 FGFR1P11362 822 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 BDNFP23560 247 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 PKN2Q16513 984 aaKnown RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 PCSK7Q16549 785 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 SH2D4BQ5SQS7 431 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 GDF6Q6KF10 455 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 TNIP3Q96KP6 325 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 C16orf70Q9BSU1 422 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 DPEP3Q9H4B8 488 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 IPPQ9Y573 584 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 GPR182O15218 404 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 ADCY6O43306 1168 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 TOMM70O94826 608 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 C4BPAP04003 597 aaKnown RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 IRF1P10914 325 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 CREB1P16220 341 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 AP3M2P53677 418 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 SPATA2LQ8IUW3 424 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 IQCKQ8N0W5 287 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 OR6P1Q8NGX9 317 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 RUBCNQ92622 972 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 C12orf65Q9H3J6 166 aaKnown RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 PSMC3IPQ9P2W1 217 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 TBKBP1A7MCY6 615 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 ELF1P32519 619 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 RAD23BP54727 409 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 THOC5Q13769 683 aaKnown RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 NFIL3Q16649 462 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 QPCTQ16769 361 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 ZNF618Q5T7W0 954 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms