RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 GOLPH3Q9H4A6 298 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 KCNMB3Q9NPA1 279 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SLAMF7Q9NQ25 335 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 MRPL17Q9NRX2 175 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 GIT1Q9Y2X7 761 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SLIT2O94813 1529 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ZNF541Q9H0D2 1346 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 MYO1CO00159 1063 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 FBXO24O75426 580 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SEC31AO94979 1220 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 ATP1A1P05023 1023 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 CYP11B1P15538 503 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 PPM1AP35813 382 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 RARRES1P49788 294 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SLC12A3P55017 1021 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 MCCD1P59942 119 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 POU5F1BQ06416 359 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 MCL1Q07820 350 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ZNF268Q14587 947 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 LBRQ14739 615 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 NCAPHQ15003 741 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 EFTUD2Q15029 972 aaKnown RBP eCLIP4.4□□□□□ -1.7
CFTR-201ENST00000003084 LLGL1Q15334 1064 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 GLRA4Q5JXX5 417 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 PPP1R26Q5T8A7 1209 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 C11orf74Q86VG3 221 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 NUDCD3Q8IVD9 361 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 VCPIP1Q96JH7 1222 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SRPK1Q96SB4 655 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 OSBPL8Q9BZF1 889 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 INTS13Q9NVM9 706 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 KLHL11Q9NVR0 708 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 DDIT4Q9NX09 232 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 AFF4Q9UHB7 1163 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 TTC7AQ9ULT0 858 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 LTBP3Q9NS15 1303 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SMIM35A0A1B0GVV1 85 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SLC12A8A0AV02 714 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 LACTBL1A8MY62 500 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 GOLGA8TH3BQL2 631 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 CCDC22O60826 627 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 SGPL1O95470 568 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 AGTP01019 485 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ESRRAP11474 423 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 CYP2A6P11509 494 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 MYL4P12829 197 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 HOXB1P14653 301 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 COL9A1P20849 921 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 COMTP21964 271 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 RTP1P59025 263 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 PTPN11Q06124 597 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 SMARCB1Q12824 385 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ITGA9Q13797 1035 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.4□□□□□ -1.7
CFTR-201ENST00000003084 PTRHD1Q6GMV3 140 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 NECAB2Q7Z6G3 386 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 DSG4Q86SJ6 1040 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ABRAQ8N0Z2 381 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 RPRD1AQ96P16 312 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 MTMR9Q96QG7 549 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 TBCBQ99426 244 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 FAM167BQ9BTA0 163 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 PITPNM3Q9BZ71 974 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 CELF4Q9BZC1 486 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 ROPN1BQ9BZX4 212 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.4□□□□□ -1.7
CFTR-201ENST00000003084 ROPN1Q9HAT0 212 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 CYP4F11Q9HBI6 524 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 DMAP1Q9NPF5 467 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 PDGFCQ9NRA1 345 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ZC3H7BQ9UGR2 993 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 ZNF510Q9Y2H8 683 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 AHDC1Q5TGY3 1603 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 CASTOR2A6NHX0 329 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 PPFIA2O75334 1257 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 PSMD10O75832 226 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CRTAMO95727 393 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SYF2O95926 243 aaKnown RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 TP53P04637 393 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 YWHAQP27348 245 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 HMOX2P30519 316 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 PPP2R2AP63151 447 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 STARD3Q14849 445 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ACAP1Q15027 740 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 MTFR1Q15390 333 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SPRYD7Q5W111 196 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ERAP2Q6P179 960 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 FIBCD1Q8N539 461 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 LZTR1Q8N653 840 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 PXYLP1Q8TE99 480 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SLC20A1Q8WUM9 679 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 OSCP1Q8WVF1 389 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ZBTB9Q96C00 473 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 FGD4Q96M96 766 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CNPY3Q9BT09 278 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 IL25Q9H293 177 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SEMA6BQ9H3T3 888 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 BRD7Q9NPI1 651 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 GIMAP4Q9NUV9 329 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms