RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Sparcl1P70663 650 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ddr1Q03146 911 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gpr15Q0VDU3 360 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Stt3bQ3TDQ1 823 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ica1lQ3TY65 431 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Vps51Q3UVL4 782 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zfp120Q8BZW4 436 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Wdr27Q8C5V5 780 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pard3bQ9CSB4 1203 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 IkbipQ9DBZ1 373 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Atp8b4A2ANX3 1194 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm10719E9Q7T3 227 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pcdh9F8VPK8 1237 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gdf6P43028 454 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Stmn4P63042 189 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Adamts1P97857 968 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Aarsd1Q3THG9 412 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Inppl1Q6P549 1257 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Xpo1Q6P5F9 1071 aaKnown RBP16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam185aQ7TPD2 378 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam78aQ8C552 283 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Mtss1Q8R1S4 759 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pcdha5Q91Y15 934 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zfp42P22227 288 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zdhhc18Q5Y5T2 380 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gprc5aQ8BHL4 356 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Nipal1Q8BMW7 416 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ankrd52Q8BTI7 1076 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Als2cr12Q8BVM7 383 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam126bQ8C729 530 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Trpm8Q8R4D5 1104 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Trim60Q8VI40 466 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ankrd54Q91WK7 299 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 Dusp21Q9D9D8 189 aa16.54■□□□□ 0.24
Trim39-203ENSMUST00000113706 DgkdE9PUQ8 1220 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 E030030I06RikJ3QML9 246 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Serpinb9O08797 374 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ptpn9O35239 593 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pih1d3Q3KNI6 218 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Taok1Q5F2E8 1001 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Slc30a9Q5IRJ6 567 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Klra4Q60651 263 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tfdp2Q64163 446 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tbc1d12Q6A039 696 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Iffo1Q8BXL9 562 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ttc39bQ8BYY4 617 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Itgbl1Q8VDV0 494 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 AclyQ91V92 1091 aaKnown RBP16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Akirin1Q99LF1 191 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Serpinb6cW4VSP4 379 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm3739L7N296 216 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cyp2b9P12790 491 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 CtswP56203 371 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tmem120bQ3TA38 339 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Rcsd1Q3UZA1 412 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 StilQ60988 1262 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Atl2Q6PA06 583 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pan2Q8BGF7 1200 aaKnown RBP16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Lrrc14Q8VC16 493 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Atp6ap2Q9CYN9 350 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 2610008E11RikG3X964 669 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Dmp1O55188 503 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 CcnoP0C242 352 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Rab20P35295 233 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gad2P48320 585 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cyp2c38P56655 490 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Eif3eP60229 445 aaKnown RBP16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Col6a1Q04857 1025 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 PterQ60866 349 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Plk4Q64702 925 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Znf512Q69Z99 562 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ube2q2Q8K2Z8 378 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Sdcbp2Q99JZ0 292 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zmynd10Q99ML0 440 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tlr6Q9EPW9 795 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tmem59Q9QY73 323 aa16.53■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam155bA2BDP1 471 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Daw1D3Z7A5 415 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Trim30bE9PVL6 203 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm45837F7D3W5 961 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Soat2O88908 525 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ugt3a1Q3UP75 523 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pih1h3bQ8C6P5 218 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ints9Q8K114 658 aaKnown RBP16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pcdhb2Q91Y00 799 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pde2aQ922S4 916 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 SncaipQ99ME3 962 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Znf654Q9DAU9 571 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 Mpp2Q9WV34 552 aa16.52■□□□□ 0.24
Trim39-203ENSMUST00000113706 GsrP47791 500 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Kcnn2P58390 839 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Nsun2Q1HFZ0 757 aaKnown RBP16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Nipal4Q8BZF2 406 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Inpp5fQ8CDA1 1132 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Lrrc66Q8K0B3 872 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Prpf39Q8K2Z2 665 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dnajc28Q8VCE1 385 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Clstn3Q99JH7 956 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Lpin3Q99PI4 848 aa16.52■□□□□ 0.23
Trim39-203ENSMUST00000113706 Bace2Q9JL18 514 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms