RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 RictorQ6QI06 1708 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fibcd1A2AV25 459 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kifc5bE9PUA5 672 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Clca3bE9PUL3 1044 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zbtb7aO88939 569 aaKnown RBP10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 InvsO89019 1062 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Myl4P09541 193 aaKnown RBP10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 E2f2P56931 443 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Trim67Q505D9 768 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Brsk1Q5RJI5 778 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nr1d2Q60674 576 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kiaa1841Q68FF0 718 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Best2Q8BGM5 508 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Phka2Q8BWJ3 1235 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cfap61Q8CEL2 1252 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rbm19Q8R3C6 952 aaKnown RBP10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Golm1Q91XA2 393 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Txndc12Q9CQU0 170 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 1700013H16RikQ9DAC5 291 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mrpl46Q9EQI8 283 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kifc1Q9QWT9 674 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mta2Q9R190 668 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nrg4Q9WTX4 115 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Adam17Q9Z0F8 827 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm5160F8VPN3 147 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Olfr694K7N641 315 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm6502L7N456 481 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dnmt3bO88509 859 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 NppaP05125 152 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 KitP05532 979 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Prl3d1P18121 224 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kcnn3P58391 732 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nutm2Q3V0C3 733 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 SynaQ5G5D5 617 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fam183bQ5NC57 135 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Proser1Q5PRE5 913 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nlrp9aQ66X03 949 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tbc1d12Q6A039 696 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 AardQ811W1 167 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pdk1Q8BFP9 434 aaKnown RBP10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fbxw8Q8BIA4 598 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kctd20Q8CDD8 419 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 SrrdQ8K2M3 249 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wdr83Q9DAJ4 315 aaKnown RBP10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tex21Q9R0U9 575 aa10.07□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm27029A2A4P4 543 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ttc38A3KMP2 465 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Serpinb2P12388 415 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gnao1P18872 354 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 TbcaP48428 108 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gata5P97489 404 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ttc39dQ0VF76 604 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cdca2Q14B71 982 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mif4gdQ3UBZ5 222 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ece1Q4PZA2 769 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Srrm1Q52KI8 946 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmtc2Q56A06 836 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm4952Q5FW57 296 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Bpifb1Q61114 474 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Krt32Q62168 407 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ankle2Q6P1H6 964 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Serpinb3dQ6UKZ0 387 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Deup1Q7M6Y5 601 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Actr5Q80US4 605 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Llgl1Q80Y17 1036 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pi4kbQ8BKC8 816 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gtf3c4Q8BMQ2 817 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Abraxas1Q8BPZ8 407 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Lonp1Q8CGK3 949 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Stn1Q8K2X3 378 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rnh1Q91VI7 456 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Krtap5-3Q9D226 196 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nos1apQ9D3A8 503 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dtwd1Q9D8U7 304 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slco1a4Q9EP96 670 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Capn7Q9R1S8 813 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gpaa1Q9WTK3 621 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 FarsbQ9WUA2 589 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mtmr9Q9Z2D0 545 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ptgdr2Q9Z2J6 382 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kpna7C0LLJ0 499 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm4871D3Z0W7 314 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm10477F6SW83 55 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Olfr67F8VPJ8 320 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Bcl7cO08664 217 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 GzmkO35205 263 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Clcn7O70496 803 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cd4P06332 457 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Aldh3a1P47739 453 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nfatc3P97305 1075 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zbtb14Q08376 449 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Trim71Q1PSW8 855 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Hexim2Q3TVI4 313 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ccdc106Q3ULM0 279 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Eme2Q56A04 373 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fxr1Q61584 677 aaKnown RBP10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Asic4Q7TNS7 539 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rexo1Q7TT28 1213 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm9758Q80ZT2 255 aa10.06□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Strip2Q8C9H6 844 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms