RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cul4aQ3TCH7 759 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oas1gQ8K469 367 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rps6kl1Q8R2S1 544 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Alg9Q8VDI9 611 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 HnrnprQ8VHM5 632 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Taf11Q99JX1 211 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tlr9Q9EQU3 1032 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zmynd8A2A484 1235 aaKnown RBP10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Siah3B2RWG3 268 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Itgb3O54890 787 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Acot1O55137 419 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sox10Q04888 466 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Syn2Q64332 586 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Lrrc8eQ66JT1 795 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 B3galnt2Q8BG28 504 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Grik4Q8BMF5 956 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Scara3Q8C850 606 aa10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Serbp1Q9CY58 407 aaKnown RBP10.65□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm1141B9EJU1 475 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ace3D0G895 737 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr726E9Q8X3 321 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm7694J3QNH8 270 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Myl4P09541 193 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pou4f1P17208 421 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mcpt4P21812 246 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 MafP54843 370 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 NcstnP57716 708 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Atp6v1b2P62814 511 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Smad1P70340 465 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr725Q05A45 321 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Spc25Q3UA16 226 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CcnjlQ5SRT8 387 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ptger2Q62053 362 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ttc24Q8BYG0 334 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dennd2aQ8C4S8 1000 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Phc3Q8CHP6 981 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ttc4Q8R3H9 386 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Q922M7 232 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kif19Q99PT9 997 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Klhl28Q9CR40 571 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rfc5Q9D0F6 339 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PtsQ9R1Z7 144 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 4930444G20RikD3Z741 495 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm379J3QQ19 296 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr743L7N1Y2 311 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rgs4O08899 205 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gnat1P20612 350 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Znf112Q0VAW7 879 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rbm20Q3UQS8 1199 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 R3hdm4Q4VBF2 262 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Krt42Q6IFX2 452 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Capn11Q6J756 714 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 HpseQ6YGZ1 535 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slitrk1Q810C1 696 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 AarsQ8BGQ7 968 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Enpp4Q8BTJ4 456 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccdc80Q8R2G6 949 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dach2Q925Q8 634 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 MceeQ9D1I5 178 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tll2Q9WVM6 1012 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gbp4A4UUI3 631 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr310B2RVZ1 332 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm4871D3Z0W7 314 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Lilra5D3Z7A9 295 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Spata31d1dE9Q5W2 1247 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 2610008E11RikG3X964 669 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdk14O35495 469 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Serpina6Q06770 397 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ppm1jQ149T7 507 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Klrg2Q3UM83 387 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Senp5Q6NXL6 749 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Thnsl1Q8BH55 747 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 TwnkQ8CIW5 685 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pcdha3Q91Y16 942 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trim16Q99PP9 556 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tssk3Q9D2E1 268 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ddit4Q9D3F7 229 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Hao1Q9WU19 370 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 FscbA1EGX6 1074 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ces1bD3Z5G7 567 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dthd1E9PZX1 795 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr611K7N609 323 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr612L7N462 323 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ass1P16460 412 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Elk3P41971 409 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 YwhahP68510 246 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mgat3Q10470 538 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Axdnd1Q3UZ57 424 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pdp2Q504M2 532 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rundc3bQ6PDC0 408 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr23Q7TRX4 325 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Aste1Q8BIR2 672 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tmtc3Q8BRH0 920 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Elmo3Q8BYZ7 720 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccdc134Q8C7V8 229 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PygbQ8CI94 843 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 BlmhQ8R016 455 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Angel1Q8VCU0 667 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kdelr1Q99JH8 212 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rnf135Q9CWS1 417 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms