RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 RptorQ8K4Q0 1335 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cacna1sQ02789 1880 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cyp2b13A6H6J2 491 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 1700064H15RikD3Z4D4 81 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 C130060K24RikG3UWA8 416 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 EpoP07321 192 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cxcr2P35343 359 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pcsk1P63239 753 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Srebf2Q3U1N2 1130 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Akap7Q7TN79 314 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gpr139Q80UC8 345 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zdhhc15Q8BGJ0 337 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Arhgap29Q8CGF1 1266 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cdc42ep5Q9Z0X0 150 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Myh8P13542 1937 aa11.27□□□□□ -0.6
Msh3-201ENSMUST00000022220 Myo7aP97479 2215 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rhox3fA2ANE1 215 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 MipepA6H611 711 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lonrf1D3YY23 762 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ccdc144bE9PVZ3 520 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm20721E9Q2U8 318 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rdh7O88451 316 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tbx3P70324 741 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 NxnP97346 435 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 HdxQ14B70 692 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tmem65Q4VAE3 234 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zfyve28Q6ZPK7 905 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lrfn2Q80TG9 788 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gramd1bQ80TI0 738 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tubgcp5Q8BKN5 1024 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dnajc9Q91WN1 259 aaKnown RBP11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pkp2Q9CQ73 795 aaKnown RBP11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dmap1Q9JI44 468 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 EsrraO08580 422 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 JchainP01592 159 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fam47cQ14BE7 430 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cul4aQ3TCH7 759 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 GsapQ3TCV3 858 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Stk40Q7TNL3 435 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Btbd10Q80X66 475 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Elac2Q80Y81 831 aaKnown RBP11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ugt3a2Q8JZZ0 523 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr532Q8VGT4 309 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Psmd9Q9CR00 222 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Angptl2Q9R045 493 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Grk1Q9WVL4 564 aa11.27□□□□□ -0.61
Msh3-201ENSMUST00000022220 Atp8b4A2ANX3 1194 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 PotegA5H0M4 473 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rabgap1lA6H6A9 815 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pex10B1AUE5 324 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gcnt4E9Q649 455 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 SprtnG3X912 497 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Foxm1O08696 760 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Serpinb9O08797 374 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 IppP28575 584 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 MafP54843 370 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Arf4P61750 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Znf367Q0VDT2 340 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ecm1Q61508 559 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cyp3a11Q64459 504 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fndc3bQ6NWW9 1207 aaKnown RBP11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gbp5Q8CFB4 590 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tada2aQ8CHV6 443 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mrpl58Q8R035 206 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zdhhc3Q8R173 299 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Catsper1Q91ZR5 686 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 PnkpQ9JLV6 522 aaKnown RBP11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Myh3P13541 1940 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 PtproE9Q612 1226 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cdk16Q04735 496 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pih1d3Q3KNI6 218 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Agxt2Q3UEG6 513 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 XiapQ60989 496 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 ThrspQ62264 150 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dnajc6Q80TZ3 938 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 SgczQ8BX51 311 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Clic5Q8BXK9 251 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Robo4Q8C310 1012 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Celf3Q8CIN6 465 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Nudt13Q8JZU0 352 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 FdpsQ920E5 353 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Arhgef25Q9CWR0 618 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tbc1d15Q9CXF4 671 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Prpsap1Q9D0M1 356 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cpsf3Q9QXK7 684 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Morc1Q9WVL5 950 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tbkbp1A2A9T0 611 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup10A2BIN1 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup14A2CEK7 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup19A9C497 187 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup15A9R9W0 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup17B5X0G2 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 TroapB7ZNG4 668 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lipo2D3YY49 398 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup8E9PVW0 235 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup7E9QA79 235 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup6P02762 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup1P11588 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mup2P11589 180 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pou5f1P20263 352 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms