RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Slc10a3P21129 473 aa18.4■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 TxkP42682 527 aa18.4■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Angel2Q8K1C0 544 aa18.4■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Sh3kbp1Q8R550 709 aaKnown RBP18.4■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Serpinb9bQ9DAV6 377 aa18.4■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Trpm5Q9JJH7 1158 aa18.4■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Plxnb2B2RXS4 1842 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Plekhg4A0A1L1SU27 1217 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Gm15155B1B034 138 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 DffaO54786 331 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Dynlt1P51807 113 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 DmpkP54265 631 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Fam117bQ3U3E2 584 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 2700097O09RikQ6PGK3 301 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Arhgap10Q6Y5D8 786 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Cog2Q921L5 731 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 MrgbpQ9DAT2 204 aa18.39■□□□□ 0.54
Sqstm1-201ENSMUST00000015981 Ssxb9A2BI93 185 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pdlim7Q3TJD7 457 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pcdhga7Q6DD96 935 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cnot6Q8K3P5 557 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Smyd2Q8R5A0 433 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 St5Q924W7 1134 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Kdelr1Q99JH8 212 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gtf2ird2Q99NI3 936 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ddx56Q9D0R4 546 aaKnown RBP18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ptf1aQ9QX98 324 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Trpc2Q9R244 1172 aa18.39■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 NynrinQ5DTZ0 1840 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Olfr839-ps1A0A1D5RMH6 312 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Nlrc4Q3UP24 1024 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Elf3Q3UPW2 391 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Abi3bpQ59IW6 1179 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Klra8Q60682 266 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gpr151Q7TSN6 422 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Kcng4Q80XM3 506 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pqlc1Q80XM9 271 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Vgll2Q8BGW8 322 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Echs1Q8BH95 290 aaKnown RBP18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pcmtd2Q8BHD8 359 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Sap130Q8BIH0 1057 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 WdpcpQ8C456 722 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Emilin2Q8K482 1074 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ssx2ipQ8VC66 615 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Psmd6Q99JI4 389 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 MmadhcQ99LS1 296 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Rfx5Q9JL61 658 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Nr1h3Q9Z0Y9 445 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cntnap5cQ0V8T7 1305 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Fam171a2A2A699 822 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 UmpsP13439 481 aaKnown RBP18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ckmt1P30275 418 aaKnown RBP18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 YwhazP63101 245 aaKnown RBP18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Thumpd3P97770 505 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 VegfaQ00731 214 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Alkbh5Q3TSG4 395 aaKnown RBP18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ppp1r14bQ62084 147 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 ProcrQ64695 242 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pnma1Q8C1C8 353 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Kbtbd13Q8C828 458 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ttc8Q8VD72 515 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pcdha2Q91Y17 948 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pcsk1nQ9QXV0 258 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 RecqlQ9Z129 648 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cd320Q9Z1P5 260 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Frmpd3A0A140LIW3 1774 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ly75Q60767 1723 aa18.38■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Armt1A6H630 439 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm4846B2RWH8 538 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Apol11aE9PZG0 334 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Aff2O55112 1272 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 LmnaP48678 665 aaKnown RBP18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Matn1P51942 500 aaKnown RBP18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Jak1P52332 1153 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Fbp2P70695 339 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cog7Q3UM29 770 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Tmem102Q3UPR7 509 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 4933427I04RikQ3V053 235 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Psg28Q4KL66 472 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Rab34Q64008 259 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 EtnpplQ8BWU8 499 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Adamtsl1Q8BLI0 1745 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Olfr600E9PUN7 314 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 LdhbP16125 334 aaKnown RBP18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 SagP20443 403 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Plk2P53351 682 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ccndbp1Q3TVC7 356 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Arhgap28Q8BN58 729 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Phka2Q8BWJ3 1235 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Calhm4Q8CE93 315 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 TfQ921I1 697 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Psrc1Q9D0P7 329 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Plin3Q9DBG5 437 aa18.37■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mocs3A2BDX3 460 aaKnown RBP18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup10A2BIN1 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup14A2CEK7 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup19A9C497 187 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup15A9R9W0 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup17B5X0G2 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup8E9PVW0 235 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms