RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DISP3Q9P2K9 1392 aa24.35■■□□□ 1.49
PHGDH-230ENST00000641927 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
PHGDH-230ENST00000641927 ZNF335Q9H4Z2 1342 aaPredicted RBP24.34■■□□□ 1.49
PHGDH-230ENST00000641927 PROSER2Q86WR7 435 aaPredicted RBP24.33■■□□□ 1.49
PHGDH-230ENST00000641927 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.48
PHGDH-230ENST00000641927 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
PHGDH-230ENST00000641927 KIF7Q2M1P5 1343 aa24.32■■□□□ 1.48
PHGDH-230ENST00000641927 EVC2Q86UK5 1308 aa24.32■■□□□ 1.48
PHGDH-230ENST00000641927 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
PHGDH-230ENST00000641927 C14orf37Q86TY3 774 aa24.3■■□□□ 1.48
PHGDH-230ENST00000641927 CCDC7Q96M83 1385 aa24.3■■□□□ 1.48
PHGDH-230ENST00000641927 CDCA8Q53HL2 280 aa24.3■■□□□ 1.48
PHGDH-230ENST00000641927 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.28■■□□□ 1.48
PHGDH-230ENST00000641927 SRPK2P78362 688 aaKnown RBP24.27■■□□□ 1.48
PHGDH-230ENST00000641927 TULP4Q9NRJ4 1543 aa24.27■■□□□ 1.48
PHGDH-230ENST00000641927 CDK19Q9BWU1 502 aa24.26■■□□□ 1.47
PHGDH-230ENST00000641927 CABP2Q9NPB3 220 aa24.25■■□□□ 1.47
PHGDH-230ENST00000641927 WASLO00401 505 aaPredicted RBP24.24■■□□□ 1.47
PHGDH-230ENST00000641927 TMEM94Q12767 1356 aa24.24■■□□□ 1.47
PHGDH-230ENST00000641927 ADGRB2O60241 1585 aa24.22■■□□□ 1.47
PHGDH-230ENST00000641927 NALCNQ8IZF0 1738 aa24.22■■□□□ 1.47
PHGDH-230ENST00000641927 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
PHGDH-230ENST00000641927 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
PHGDH-230ENST00000641927 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
PHGDH-230ENST00000641927 LRRC7Q96NW7 1537 aa24.19■■□□□ 1.46
PHGDH-230ENST00000641927 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
PHGDH-230ENST00000641927 PUS7Q96PZ0 661 aaKnown RBP24.17■■□□□ 1.46
PHGDH-230ENST00000641927 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
PHGDH-230ENST00000641927 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
PHGDH-230ENST00000641927 ATAD2Q6PL18 1390 aa24.15■■□□□ 1.46
PHGDH-230ENST00000641927 CDC42BPGQ6DT37 1551 aa24.15■■□□□ 1.46
PHGDH-230ENST00000641927 NUDT16Q96DE0 195 aaKnown RBP24.14■■□□□ 1.45
PHGDH-230ENST00000641927 MSH6P52701 1360 aa24.13■■□□□ 1.45
PHGDH-230ENST00000641927 ATF3P18847 181 aa24.12■■□□□ 1.45
PHGDH-230ENST00000641927 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
PHGDH-230ENST00000641927 SLC12A5Q9H2X9 1139 aa24.11■■□□□ 1.45
PHGDH-230ENST00000641927 PRR36Q9H6K5 1346 aa24.11■■□□□ 1.45
PHGDH-230ENST00000641927 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
PHGDH-230ENST00000641927 FMN2Q9NZ56 1722 aa24.1■■□□□ 1.45
PHGDH-230ENST00000641927 MYOM1P52179 1685 aa24.1■■□□□ 1.45
PHGDH-230ENST00000641927 ATP7BP35670 1465 aa24.1■■□□□ 1.45
PHGDH-230ENST00000641927 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
PHGDH-230ENST00000641927 CCDC61Q9Y6R9 512 aa24.09■■□□□ 1.45
PHGDH-230ENST00000641927 PANK3Q9H999 370 aa24.08■■□□□ 1.44
PHGDH-230ENST00000641927 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
PHGDH-230ENST00000641927 DIEXFQ68CQ4 756 aaKnown RBP24.07■■□□□ 1.44
PHGDH-230ENST00000641927 CADPS2Q86UW7 1296 aa24.07■■□□□ 1.44
PHGDH-230ENST00000641927 NINLQ9Y2I6 1382 aa24.07■■□□□ 1.44
PHGDH-230ENST00000641927 DCCP43146 1447 aa24.06■■□□□ 1.44
PHGDH-230ENST00000641927 ANKARQ7Z5J8 1434 aa24.06■■□□□ 1.44
PHGDH-230ENST00000641927 USP32Q8NFA0 1604 aa24.06■■□□□ 1.44
PHGDH-230ENST00000641927 RGPD8O14715 1765 aaPredicted RBP24.04■■□□□ 1.44
PHGDH-230ENST00000641927 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
PHGDH-230ENST00000641927 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
PHGDH-230ENST00000641927 ESCO1Q5FWF5 840 aa24.02■■□□□ 1.44
PHGDH-230ENST00000641927 PMFBP1Q8TBY8 1022 aa24.02■■□□□ 1.44
PHGDH-230ENST00000641927 TOPAZ1Q8N9V7 1692 aa24.01■■□□□ 1.43
PHGDH-230ENST00000641927 HDGFL2Q7Z4V5 671 aaPredicted RBP24.01■■□□□ 1.43
PHGDH-230ENST00000641927 ANKRD36BQ8N2N9 1353 aa24■■□□□ 1.43
PHGDH-230ENST00000641927 MST1RQ04912 1400 aa23.99■■□□□ 1.43
PHGDH-230ENST00000641927 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
PHGDH-230ENST00000641927 C1orf167Q5SNV9 1468 aa23.98■■□□□ 1.43
PHGDH-230ENST00000641927 PLEKHG3A1L390 1219 aa23.98■■□□□ 1.43
PHGDH-230ENST00000641927 NGDNQ8NEJ9 315 aaKnown RBP23.98■■□□□ 1.43
PHGDH-230ENST00000641927 ORAI2Q96SN7 254 aa23.98■■□□□ 1.43
PHGDH-230ENST00000641927 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
PHGDH-230ENST00000641927 ACEP12821 1306 aa23.97■■□□□ 1.43
PHGDH-230ENST00000641927 CD163L1Q9NR16 1453 aa23.96■■□□□ 1.43
PHGDH-230ENST00000641927 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
PHGDH-230ENST00000641927 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
PHGDH-230ENST00000641927 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.43
PHGDH-230ENST00000641927 SLAIN2Q9P270 581 aa23.95■■□□□ 1.42
PHGDH-230ENST00000641927 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
PHGDH-230ENST00000641927 NSD3Q9BZ95 1437 aa23.94■■□□□ 1.42
PHGDH-230ENST00000641927 PER1O15534 1290 aaPredicted RBP23.93■■□□□ 1.42
PHGDH-230ENST00000641927 CPSF1Q10570 1443 aaKnown RBP23.93■■□□□ 1.42
PHGDH-230ENST00000641927 ZNF692Q9BU19 519 aaPredicted RBP23.92■■□□□ 1.42
PHGDH-230ENST00000641927 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
PHGDH-230ENST00000641927 AKAP12Q02952 1782 aa23.89■■□□□ 1.42
PHGDH-230ENST00000641927 FOXO3O43524 673 aa23.89■■□□□ 1.42
PHGDH-230ENST00000641927 PSME1Q06323 249 aa23.88■■□□□ 1.41
PHGDH-230ENST00000641927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.88■■□□□ 1.41
PHGDH-230ENST00000641927 CERKQ8TCT0 537 aa23.88■■□□□ 1.41
PHGDH-230ENST00000641927 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
PHGDH-230ENST00000641927 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
PHGDH-230ENST00000641927 ANP32CO43423 234 aa23.87■■□□□ 1.41
PHGDH-230ENST00000641927 CC2D1BQ5T0F9 858 aaKnown RBP23.87■■□□□ 1.41
PHGDH-230ENST00000641927 USP6P35125 1406 aa23.86■■□□□ 1.41
PHGDH-230ENST00000641927 BRINP3Q76B58 766 aa23.86■■□□□ 1.41
PHGDH-230ENST00000641927 MON2Q7Z3U7 1717 aa23.86■■□□□ 1.41
PHGDH-230ENST00000641927 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
PHGDH-230ENST00000641927 TOM1O60784 492 aa23.85■■□□□ 1.41
PHGDH-230ENST00000641927 XPCQ01831 940 aaPredicted RBP23.84■■□□□ 1.41
PHGDH-230ENST00000641927 AMER1Q5JTC6 1135 aaPredicted RBP23.84■■□□□ 1.41
PHGDH-230ENST00000641927 IQSEC2Q5JU85 1478 aa23.83■■□□□ 1.4
PHGDH-230ENST00000641927 UBAP1LF5GYI3 381 aa23.83■■□□□ 1.4
PHGDH-230ENST00000641927 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.4
PHGDH-230ENST00000641927 DDX17Q92841 729 aaKnown RBP23.83■■□□□ 1.4
PHGDH-230ENST00000641927 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
PHGDH-230ENST00000641927 NPHP3Q7Z494 1330 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms