RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ESF1Q9H501 851 aaKnown RBP23.73■■□□□ 1.39
PHGDH-226ENST00000641756 MORC1Q86VD1 984 aa23.72■■□□□ 1.39
PHGDH-226ENST00000641756 PUS7Q96PZ0 661 aaKnown RBP23.72■■□□□ 1.39
PHGDH-226ENST00000641756 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-226ENST00000641756 CCDC146Q8IYE0 955 aa23.72■■□□□ 1.39
PHGDH-226ENST00000641756 MINK1Q8N4C8 1332 aaPredicted RBP23.71■■□□□ 1.39
PHGDH-226ENST00000641756 PLEKHH1Q9ULM0 1364 aa23.71■■□□□ 1.39
PHGDH-226ENST00000641756 POGKQ9P215 609 aa23.71■■□□□ 1.39
PHGDH-226ENST00000641756 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
PHGDH-226ENST00000641756 ZMYM3Q14202 1370 aa23.7■■□□□ 1.38
PHGDH-226ENST00000641756 RRP1P56182 461 aaKnown RBP23.7■■□□□ 1.38
PHGDH-226ENST00000641756 SRPK2P78362 688 aaKnown RBP23.7■■□□□ 1.38
PHGDH-226ENST00000641756 ANKRD36BQ8N2N9 1353 aa23.68■■□□□ 1.38
PHGDH-226ENST00000641756 USP32Q8NFA0 1604 aa23.68■■□□□ 1.38
PHGDH-226ENST00000641756 CGNL1Q0VF96 1302 aa23.67■■□□□ 1.38
PHGDH-226ENST00000641756 POLR3AO14802 1390 aaPredicted RBP23.65■■□□□ 1.38
PHGDH-226ENST00000641756 A0A1W2PP64 1363 aa23.62■■□□□ 1.37
PHGDH-226ENST00000641756 APAF1O14727 1248 aa23.62■■□□□ 1.37
PHGDH-226ENST00000641756 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
PHGDH-226ENST00000641756 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
PHGDH-226ENST00000641756 CCDC136Q96JN2 1154 aa23.6■■□□□ 1.37
PHGDH-226ENST00000641756 ATAD2Q6PL18 1390 aa23.6■■□□□ 1.37
PHGDH-226ENST00000641756 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
PHGDH-226ENST00000641756 RBM19Q9Y4C8 960 aaKnown RBP23.59■■□□□ 1.37
PHGDH-226ENST00000641756 NINLQ9Y2I6 1382 aa23.59■■□□□ 1.37
PHGDH-226ENST00000641756 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
PHGDH-226ENST00000641756 GOLGA2Q08379 1002 aa23.59■■□□□ 1.37
PHGDH-226ENST00000641756 CDK19Q9BWU1 502 aa23.59■■□□□ 1.37
PHGDH-226ENST00000641756 MTHFSP49914 203 aa23.58■■□□□ 1.37
PHGDH-226ENST00000641756 TNRQ92752 1358 aa23.58■■□□□ 1.37
PHGDH-226ENST00000641756 EXOC6Q8TAG9 804 aa23.57■■□□□ 1.36
PHGDH-226ENST00000641756 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
PHGDH-226ENST00000641756 NSD2O96028 1365 aa23.57■■□□□ 1.36
PHGDH-226ENST00000641756 NRXN3Q9Y4C0 1643 aa23.57■■□□□ 1.36
PHGDH-226ENST00000641756 PLIN1O60240 522 aa23.56■■□□□ 1.36
PHGDH-226ENST00000641756 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.56■■□□□ 1.36
PHGDH-226ENST00000641756 DLC1Q96QB1 1528 aa23.55■■□□□ 1.36
PHGDH-226ENST00000641756 ABCC11Q96J66 1382 aa23.55■■□□□ 1.36
PHGDH-226ENST00000641756 CD163L1Q9NR16 1453 aa23.55■■□□□ 1.36
PHGDH-226ENST00000641756 TERF2IPQ9NYB0 399 aa23.54■■□□□ 1.36
PHGDH-226ENST00000641756 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
PHGDH-226ENST00000641756 METP08581 1390 aa23.53■■□□□ 1.36
PHGDH-226ENST00000641756 SLFN5Q08AF3 891 aa23.53■■□□□ 1.36
PHGDH-226ENST00000641756 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
PHGDH-226ENST00000641756 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
PHGDH-226ENST00000641756 CABP1Q9NZU7 370 aa23.51■■□□□ 1.35
PHGDH-226ENST00000641756 HDGFL2Q7Z4V5 671 aaPredicted RBP23.49■■□□□ 1.35
PHGDH-226ENST00000641756 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
PHGDH-226ENST00000641756 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
PHGDH-226ENST00000641756 FYB1O15117 783 aa23.48■■□□□ 1.35
PHGDH-226ENST00000641756 CEBPAP49715 358 aaPredicted RBP23.48■■□□□ 1.35
PHGDH-226ENST00000641756 HDGFP51858 240 aaKnown RBP23.48■■□□□ 1.35
PHGDH-226ENST00000641756 TXNDC2Q86VQ3 553 aa23.48■■□□□ 1.35
PHGDH-226ENST00000641756 TMEM2Q9UHN6 1383 aa23.47■■□□□ 1.35
PHGDH-226ENST00000641756 TRMT2AQ8IZ69 625 aaKnown RBP23.47■■□□□ 1.35
PHGDH-226ENST00000641756 RUNDC1Q96C34 613 aa23.46■■□□□ 1.35
PHGDH-226ENST00000641756 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.35
PHGDH-226ENST00000641756 NEUROD2Q15784 382 aa23.45■■□□□ 1.34
PHGDH-226ENST00000641756 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
PHGDH-226ENST00000641756 NLRP1Q9C000 1473 aa23.45■■□□□ 1.34
PHGDH-226ENST00000641756 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
PHGDH-226ENST00000641756 CRBNQ96SW2 442 aa23.44■■□□□ 1.34
PHGDH-226ENST00000641756 WWC1Q8IX03 1113 aa23.43■■□□□ 1.34
PHGDH-226ENST00000641756 NGEFQ8N5V2 710 aa23.43■■□□□ 1.34
PHGDH-226ENST00000641756 E9PSI1 815 aa23.42■■□□□ 1.34
PHGDH-226ENST00000641756 C20orf194Q5TEA3 1177 aa23.42■■□□□ 1.34
PHGDH-226ENST00000641756 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
PHGDH-226ENST00000641756 WASLO00401 505 aaPredicted RBP23.41■■□□□ 1.34
PHGDH-226ENST00000641756 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
PHGDH-226ENST00000641756 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
PHGDH-226ENST00000641756 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
PHGDH-226ENST00000641756 IQSEC2Q5JU85 1478 aa23.41■■□□□ 1.34
PHGDH-226ENST00000641756 MED14O60244 1454 aa23.41■■□□□ 1.34
PHGDH-226ENST00000641756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.41■■□□□ 1.34
PHGDH-226ENST00000641756 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
PHGDH-226ENST00000641756 KNDC1Q76NI1 1749 aa23.4■■□□□ 1.34
PHGDH-226ENST00000641756 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
PHGDH-226ENST00000641756 LTKP29376 864 aa23.38■■□□□ 1.33
PHGDH-226ENST00000641756 ATP7BP35670 1465 aa23.38■■□□□ 1.33
PHGDH-226ENST00000641756 TECPR2O15040 1411 aa23.37■■□□□ 1.33
PHGDH-226ENST00000641756 ADAMTS13Q76LX8 1427 aa23.37■■□□□ 1.33
PHGDH-226ENST00000641756 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
PHGDH-226ENST00000641756 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
PHGDH-226ENST00000641756 CPS1P31327 1500 aa23.36■■□□□ 1.33
PHGDH-226ENST00000641756 C3P01024 1663 aa23.36■■□□□ 1.33
PHGDH-226ENST00000641756 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
PHGDH-226ENST00000641756 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
PHGDH-226ENST00000641756 NCKAP5LQ9HCH0 1330 aa23.35■■□□□ 1.33
PHGDH-226ENST00000641756 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
PHGDH-226ENST00000641756 SIRT1Q96EB6 747 aa23.34■■□□□ 1.33
PHGDH-226ENST00000641756 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
PHGDH-226ENST00000641756 FER1L4A9Z1Z3 1794 aa23.33■■□□□ 1.33
PHGDH-226ENST00000641756 PLEKHG1Q9ULL1 1385 aa23.33■■□□□ 1.33
PHGDH-226ENST00000641756 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.32
PHGDH-226ENST00000641756 BCAR3O75815 825 aa23.32■■□□□ 1.32
PHGDH-226ENST00000641756 FBLN1P23142 703 aa23.32■■□□□ 1.32
PHGDH-226ENST00000641756 PHF23Q9BUL5 403 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-226ENST00000641756 CPSF1Q10570 1443 aaKnown RBP23.31■■□□□ 1.32
PHGDH-226ENST00000641756 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
PHGDH-226ENST00000641756 ADGRB2O60241 1585 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms