RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 TCOF1Q13428 1488 aaKnown RBP16.39■□□□□ 0.21
CASC19-229ENST00000641418 ZNF335Q9H4Z2 1342 aaPredicted RBP16.39■□□□□ 0.21
CASC19-229ENST00000641418 FAM135AQ9P2D6 1515 aa16.39■□□□□ 0.21
CASC19-229ENST00000641418 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
CASC19-229ENST00000641418 C2orf72A6NCS6 295 aa16.38■□□□□ 0.21
CASC19-229ENST00000641418 KIF3CO14782 793 aa16.38■□□□□ 0.21
CASC19-229ENST00000641418 DSG2Q14126 1118 aa16.37■□□□□ 0.21
CASC19-229ENST00000641418 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
CASC19-229ENST00000641418 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
CASC19-229ENST00000641418 CAMK2BQ13554 666 aa16.36■□□□□ 0.21
CASC19-229ENST00000641418 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.36■□□□□ 0.21
CASC19-229ENST00000641418 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
CASC19-229ENST00000641418 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
CASC19-229ENST00000641418 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
CASC19-229ENST00000641418 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
CASC19-229ENST00000641418 PLPP6Q8IY26 295 aa16.32■□□□□ 0.2
CASC19-229ENST00000641418 ARIH1Q9Y4X5 557 aaPredicted RBP16.32■□□□□ 0.2
CASC19-229ENST00000641418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
CASC19-229ENST00000641418 NLRP1Q9C000 1473 aa16.32■□□□□ 0.2
CASC19-229ENST00000641418 DNMT1P26358 1616 aaKnown RBP16.32■□□□□ 0.2
CASC19-229ENST00000641418 ABCC5O15440 1437 aa16.31■□□□□ 0.2
CASC19-229ENST00000641418 KIF15Q9NS87 1388 aa16.3■□□□□ 0.2
CASC19-229ENST00000641418 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
CASC19-229ENST00000641418 TMEM92Q6UXU6 159 aa16.29■□□□□ 0.2
CASC19-229ENST00000641418 ABCC3O15438 1527 aa16.29■□□□□ 0.2
CASC19-229ENST00000641418 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
CASC19-229ENST00000641418 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.2
CASC19-229ENST00000641418 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.2
CASC19-229ENST00000641418 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.19
CASC19-229ENST00000641418 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.19
CASC19-229ENST00000641418 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
CASC19-229ENST00000641418 DAPK1P53355 1430 aa16.26■□□□□ 0.19
CASC19-229ENST00000641418 MAMSTRQ6ZN01 415 aa16.26■□□□□ 0.19
CASC19-229ENST00000641418 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
CASC19-229ENST00000641418 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
CASC19-229ENST00000641418 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
CASC19-229ENST00000641418 NPHP4O75161 1426 aaPredicted RBP16.24■□□□□ 0.19
CASC19-229ENST00000641418 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
CASC19-229ENST00000641418 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
CASC19-229ENST00000641418 SPATA31D1Q6ZQQ2 1576 aa16.24■□□□□ 0.19
CASC19-229ENST00000641418 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
CASC19-229ENST00000641418 ARHGAP31Q2M1Z3 1444 aa16.23■□□□□ 0.19
CASC19-229ENST00000641418 MED14O60244 1454 aa16.22■□□□□ 0.19
CASC19-229ENST00000641418 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
CASC19-229ENST00000641418 MROH1Q8NDA8 1641 aa16.22■□□□□ 0.19
CASC19-229ENST00000641418 KANK1Q14678 1352 aa16.22■□□□□ 0.19
CASC19-229ENST00000641418 NEURL4Q96JN8 1562 aa16.21■□□□□ 0.19
CASC19-229ENST00000641418 TOM1O60784 492 aa16.21■□□□□ 0.19
CASC19-229ENST00000641418 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.19
CASC19-229ENST00000641418 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.18
CASC19-229ENST00000641418 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
CASC19-229ENST00000641418 CPS1P31327 1500 aa16.2■□□□□ 0.18
CASC19-229ENST00000641418 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
CASC19-229ENST00000641418 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
CASC19-229ENST00000641418 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
CASC19-229ENST00000641418 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
CASC19-229ENST00000641418 LTKP29376 864 aa16.16■□□□□ 0.18
CASC19-229ENST00000641418 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
CASC19-229ENST00000641418 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
CASC19-229ENST00000641418 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
CASC19-229ENST00000641418 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
CASC19-229ENST00000641418 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
CASC19-229ENST00000641418 MAP3K9P80192 1104 aa16.14■□□□□ 0.17
CASC19-229ENST00000641418 IDI1Q13907 227 aa16.14■□□□□ 0.17
CASC19-229ENST00000641418 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
CASC19-229ENST00000641418 DPYSL4O14531 572 aa16.13■□□□□ 0.17
CASC19-229ENST00000641418 SMYD5Q6GMV2 418 aa16.13■□□□□ 0.17
CASC19-229ENST00000641418 POLR1AO95602 1720 aaPredicted RBP16.13■□□□□ 0.17
CASC19-229ENST00000641418 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
CASC19-229ENST00000641418 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
CASC19-229ENST00000641418 TBC1D12O60347 775 aa16.13■□□□□ 0.17
CASC19-229ENST00000641418 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
CASC19-229ENST00000641418 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
CASC19-229ENST00000641418 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
CASC19-229ENST00000641418 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
CASC19-229ENST00000641418 HSPA1LP34931 641 aa16.12■□□□□ 0.17
CASC19-229ENST00000641418 TMEM2Q9UHN6 1383 aa16.11■□□□□ 0.17
CASC19-229ENST00000641418 SLC34A2O95436 690 aa16.11■□□□□ 0.17
CASC19-229ENST00000641418 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
CASC19-229ENST00000641418 CEP152O94986 1710 aa16.11■□□□□ 0.17
CASC19-229ENST00000641418 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
CASC19-229ENST00000641418 SLIT1O75093 1534 aa16.1■□□□□ 0.17
CASC19-229ENST00000641418 SEMA3EO15041 775 aa16.1■□□□□ 0.17
CASC19-229ENST00000641418 OXER1Q8TDS5 423 aa16.1■□□□□ 0.17
CASC19-229ENST00000641418 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
CASC19-229ENST00000641418 SLAIN1Q8ND83 568 aa16.09■□□□□ 0.17
CASC19-229ENST00000641418 IQGAP1P46940 1657 aa16.09■□□□□ 0.17
CASC19-229ENST00000641418 NOS1P29475 1434 aa16.08■□□□□ 0.16
CASC19-229ENST00000641418 PDIA6Q15084 440 aa16.08■□□□□ 0.16
CASC19-229ENST00000641418 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
CASC19-229ENST00000641418 SOCS7O14512 581 aa16.07■□□□□ 0.16
CASC19-229ENST00000641418 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
CASC19-229ENST00000641418 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
CASC19-229ENST00000641418 UBR1Q8IWV7 1749 aa16.07■□□□□ 0.16
CASC19-229ENST00000641418 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
CASC19-229ENST00000641418 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
CASC19-229ENST00000641418 ROCK1Q13464 1354 aa16.03■□□□□ 0.16
CASC19-229ENST00000641418 KCNA6P17658 529 aa16.02■□□□□ 0.16
CASC19-229ENST00000641418 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.16
CASC19-229ENST00000641418 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms