RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	ADGRF5	Q8IZF2	1346 aa		10.34	□□□□□ -0.75
RTTN-223	ENST00000640931	PPRC1	Q5VV67	1664 aa	Known RBP	10.34	□□□□□ -0.75
RTTN-223	ENST00000640931	TRPM2	O94759	1503 aa		10.34	□□□□□ -0.75
RTTN-223	ENST00000640931	ABCB7	O75027	752 aa		10.34	□□□□□ -0.75
RTTN-223	ENST00000640931	SPHKAP	Q2M3C7	1700 aa		10.33	□□□□□ -0.76
RTTN-223	ENST00000640931	TET3	O43151	1660 aa		10.33	□□□□□ -0.76
RTTN-223	ENST00000640931	CFAP70	Q5T0N1	1121 aa		10.33	□□□□□ -0.76
RTTN-223	ENST00000640931	TESK2	Q96S53	571 aa		10.33	□□□□□ -0.76
RTTN-223	ENST00000640931	MRS2	Q9HD23	443 aa		10.33	□□□□□ -0.76
RTTN-223	ENST00000640931	TSPOAP1	O95153	1857 aa		10.33	□□□□□ -0.76
RTTN-223	ENST00000640931	UTP14C	Q5TAP6	766 aa	Known RBP	10.32	□□□□□ -0.76
RTTN-223	ENST00000640931	MAP7D2	Q96T17	732 aa		10.32	□□□□□ -0.76
RTTN-223	ENST00000640931	TAOK2	Q9UL54	1235 aa		10.32	□□□□□ -0.76
RTTN-223	ENST00000640931	MLH3	Q9UHC1	1453 aa		10.31	□□□□□ -0.76
RTTN-223	ENST00000640931	MAP3K4	Q9Y6R4	1608 aa		10.31	□□□□□ -0.76
RTTN-223	ENST00000640931	POLR1A	O95602	1720 aa	Predicted RBP	10.31	□□□□□ -0.76
RTTN-223	ENST00000640931	TMEM51	Q9NW97	253 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	MROH2A	A6NES4	1674 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	NPAT	Q14207	1427 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	LAS1L	Q9Y4W2	734 aa	Known RBP	10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	MADD	Q8WXG6	1647 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	DIP2C	Q9Y2E4	1556 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	GPRASP1	Q5JY77	1395 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	EFCAB6	Q5THR3	1501 aa		10.3	□□□□□ -0.76
RTTN-223	ENST00000640931	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.29	□□□□□ -0.76
RTTN-223	ENST00000640931	ZNF830	Q96NB3	372 aa	Predicted RBP	10.29	□□□□□ -0.76
RTTN-223	ENST00000640931	NEO1	Q92859	1461 aa		10.29	□□□□□ -0.76
RTTN-223	ENST00000640931	SPATA31D1	Q6ZQQ2	1576 aa		10.29	□□□□□ -0.76
RTTN-223	ENST00000640931	MLEC	Q14165	292 aa		10.29	□□□□□ -0.76
RTTN-223	ENST00000640931	CFAP74	Q9C0B2	1584 aa		10.28	□□□□□ -0.76
RTTN-223	ENST00000640931	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.28	□□□□□ -0.76
RTTN-223	ENST00000640931	RICTOR	Q6R327	1708 aa		10.28	□□□□□ -0.76
RTTN-223	ENST00000640931	DIP2B	Q9P265	1576 aa		10.28	□□□□□ -0.76
RTTN-223	ENST00000640931	RNF17	Q9BXT8	1623 aa	Known RBP	10.27	□□□□□ -0.76
RTTN-223	ENST00000640931	CC2D1B	Q5T0F9	858 aa	Known RBP	10.27	□□□□□ -0.76
RTTN-223	ENST00000640931	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.27	□□□□□ -0.76
RTTN-223	ENST00000640931	SIGLEC1	Q9BZZ2	1709 aa		10.27	□□□□□ -0.76
RTTN-223	ENST00000640931	NOS1	P29475	1434 aa		10.27	□□□□□ -0.77
RTTN-223	ENST00000640931	ABCC3	O15438	1527 aa		10.27	□□□□□ -0.77
RTTN-223	ENST00000640931	IRX6	P78412	446 aa	Predicted RBP	10.27	□□□□□ -0.77
RTTN-223	ENST00000640931	TMEM132E	Q6IEE7	984 aa		10.27	□□□□□ -0.77
RTTN-223	ENST00000640931	DDRGK1	Q96HY6	314 aa		10.27	□□□□□ -0.77
RTTN-223	ENST00000640931	PANK3	Q9H999	370 aa		10.27	□□□□□ -0.77
RTTN-223	ENST00000640931	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.26	□□□□□ -0.77
RTTN-223	ENST00000640931	ANP32B	Q92688	251 aa	Known RBP	10.26	□□□□□ -0.77
RTTN-223	ENST00000640931	L1TD1	Q5T7N2	865 aa	Known RBP	10.26	□□□□□ -0.77
RTTN-223	ENST00000640931	LMTK2	Q8IWU2	1503 aa		10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	PER1	O15534	1290 aa	Predicted RBP	10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	NFKBIB	Q15653	356 aa		10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	CNPY4	Q8N129	248 aa		10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	RGS22	Q8NE09	1264 aa		10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	GLI2	P10070	1586 aa		10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	IDI1	Q13907	227 aa		10.24	□□□□□ -0.77
RTTN-223	ENST00000640931	TMF1	P82094	1093 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	PLCD3	Q8N3E9	789 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	TRAK1	Q9UPV9	953 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	SYNM	O15061	1565 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	CAMSAP1	Q5T5Y3	1602 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	KCNA4	P22459	653 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	IRX3	P78415	501 aa	Predicted RBP	10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	DMTN	Q08495	405 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	TAF3	Q5VWG9	929 aa		10.22	□□□□□ -0.77
RTTN-223	ENST00000640931	CLGN	O14967	610 aa		10.21	□□□□□ -0.77
RTTN-223	ENST00000640931	TNNT2	P45379	298 aa	Predicted RBP	10.21	□□□□□ -0.77
RTTN-223	ENST00000640931	PPP4R3B	Q5MIZ7	849 aa		10.21	□□□□□ -0.77
RTTN-223	ENST00000640931	IQGAP1	P46940	1657 aa		10.21	□□□□□ -0.77
RTTN-223	ENST00000640931	SCAF11	Q99590	1463 aa	Known RBP	10.21	□□□□□ -0.78
RTTN-223	ENST00000640931	KIF1B	O60333	1816 aa		10.21	□□□□□ -0.78
RTTN-223	ENST00000640931	ADGRB3	O60242	1522 aa		10.21	□□□□□ -0.78
RTTN-223	ENST00000640931	LAMC1	P11047	1609 aa		10.21	□□□□□ -0.78
RTTN-223	ENST00000640931	MMP14	P50281	582 aa		10.21	□□□□□ -0.78
RTTN-223	ENST00000640931	KIF20A	O95235	890 aa		10.2	□□□□□ -0.78
RTTN-223	ENST00000640931	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
RTTN-223	ENST00000640931	TMC1	Q8TDI8	760 aa		10.2	□□□□□ -0.78
RTTN-223	ENST00000640931	PNISR	Q8TF01	805 aa	Known RBP	10.2	□□□□□ -0.78
RTTN-223	ENST00000640931	MTERF4	Q7Z6M4	381 aa	Known RBP	10.19	□□□□□ -0.78
RTTN-223	ENST00000640931	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.19	□□□□□ -0.78
RTTN-223	ENST00000640931	IFT172	Q9UG01	1749 aa		10.19	□□□□□ -0.78
RTTN-223	ENST00000640931	CHRDL2	Q6WN34	429 aa		10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	WWC1	Q8IX03	1113 aa		10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	STK26	Q9P289	416 aa		10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	B4GALNT3	Q6L9W6	998 aa		10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	CERK	Q8TCT0	537 aa		10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	KCNG1	Q9UIX4	513 aa		10.18	□□□□□ -0.78
RTTN-223	ENST00000640931	MYOM2	P54296	1465 aa		10.17	□□□□□ -0.78
RTTN-223	ENST00000640931	PTMA	P06454	111 aa	Known RBP	10.17	□□□□□ -0.78
RTTN-223	ENST00000640931	TICAM2	Q86XR7	235 aa		10.17	□□□□□ -0.78
RTTN-223	ENST00000640931	ARID3A	Q99856	593 aa		10.17	□□□□□ -0.78
RTTN-223	ENST00000640931	NRXN1	Q9ULB1	1477 aa		10.17	□□□□□ -0.78
RTTN-223	ENST00000640931	KTN1	Q86UP2	1357 aa	Known RBP	10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	TERF1	P54274	439 aa		10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	GRIPAP1	Q4V328	841 aa		10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	C14orf93	Q9H972	538 aa	Known RBP	10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	PARD3	Q8TEW0	1356 aa		10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	ERVK-7	P63135	1459 aa		10.16	□□□□□ -0.78
RTTN-223	ENST00000640931	PIK3C2G	O75747	1445 aa		10.15	□□□□□ -0.78
RTTN-223	ENST00000640931	MYO5B	Q9ULV0	1848 aa		10.15	□□□□□ -0.78
RTTN-223	ENST00000640931	PPL	O60437	1756 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms