RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
GFAP-238ENST00000640859 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
GFAP-238ENST00000640859 NCKAP5LQ9HCH0 1330 aa15.23■□□□□ 0.03
GFAP-238ENST00000640859 CC2D1BQ5T0F9 858 aaKnown RBP15.22■□□□□ 0.03
GFAP-238ENST00000640859 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
GFAP-238ENST00000640859 QRICH2Q9H0J4 1663 aa15.22■□□□□ 0.03
GFAP-238ENST00000640859 UBR1Q8IWV7 1749 aa15.21■□□□□ 0.03
GFAP-238ENST00000640859 RIMS2Q9UQ26 1411 aa15.21■□□□□ 0.03
GFAP-238ENST00000640859 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
GFAP-238ENST00000640859 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.03
GFAP-238ENST00000640859 SLIT1O75093 1534 aa15.21■□□□□ 0.03
GFAP-238ENST00000640859 FKBP8Q14318 412 aa15.2■□□□□ 0.02
GFAP-238ENST00000640859 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
GFAP-238ENST00000640859 KNSTRNQ9Y448 316 aa15.2■□□□□ 0.02
GFAP-238ENST00000640859 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
GFAP-238ENST00000640859 NPHP4O75161 1426 aaPredicted RBP15.19■□□□□ 0.02
GFAP-238ENST00000640859 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
GFAP-238ENST00000640859 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
GFAP-238ENST00000640859 ARHGEF28Q8N1W1 1705 aaKnown RBP15.19■□□□□ 0.02
GFAP-238ENST00000640859 ARHGAP23Q9P227 1491 aa15.19■□□□□ 0.02
GFAP-238ENST00000640859 NEFLP07196 543 aa15.18■□□□□ 0.02
GFAP-238ENST00000640859 INSRP06213 1382 aa15.18■□□□□ 0.02
GFAP-238ENST00000640859 LTKP29376 864 aa15.17■□□□□ 0.02
GFAP-238ENST00000640859 PUS7Q96PZ0 661 aaKnown RBP15.16■□□□□ 0.02
GFAP-238ENST00000640859 MED14O60244 1454 aa15.15■□□□□ 0.02
GFAP-238ENST00000640859 PLEKHG1Q9ULL1 1385 aa15.15■□□□□ 0.02
GFAP-238ENST00000640859 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
GFAP-238ENST00000640859 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
GFAP-238ENST00000640859 CARD14Q9BXL6 1004 aa15.13■□□□□ 0.01
GFAP-238ENST00000640859 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
GFAP-238ENST00000640859 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
GFAP-238ENST00000640859 SLC26A8Q96RN1 970 aa15.11■□□□□ 0.01
GFAP-238ENST00000640859 BLMP54132 1417 aaPredicted RBP15.1■□□□□ 0.01
GFAP-238ENST00000640859 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
GFAP-238ENST00000640859 TBX22Q9Y458 520 aa15.1■□□□□ 0.01
GFAP-238ENST00000640859 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
GFAP-238ENST00000640859 EVC2Q86UK5 1308 aa15.1■□□□□ 0.01
GFAP-238ENST00000640859 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
GFAP-238ENST00000640859 STRCQ7RTU9 1775 aa15.09■□□□□ 0.01
GFAP-238ENST00000640859 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
GFAP-238ENST00000640859 USP32Q8NFA0 1604 aa15.07■□□□□ 0
GFAP-238ENST00000640859 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
GFAP-238ENST00000640859 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
GFAP-238ENST00000640859 STK26Q9P289 416 aa15.06■□□□□ 0
GFAP-238ENST00000640859 PIK3R4Q99570 1358 aa15.06■□□□□ 0
GFAP-238ENST00000640859 DIP2AQ14689 1571 aa15.06■□□□□ 0
GFAP-238ENST00000640859 KCNA6P17658 529 aa15.05■□□□□ -0
GFAP-238ENST00000640859 NSD3Q9BZ95 1437 aa15.05■□□□□ -0
GFAP-238ENST00000640859 DLC1Q96QB1 1528 aa15.05■□□□□ -0
GFAP-238ENST00000640859 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
GFAP-238ENST00000640859 ZNF335Q9H4Z2 1342 aaPredicted RBP15.04■□□□□ -0
GFAP-238ENST00000640859 PDE3BQ13370 1112 aa15.04■□□□□ -0
GFAP-238ENST00000640859 NRXN3Q9Y4C0 1643 aa15.03■□□□□ -0
GFAP-238ENST00000640859 ANKRD36BQ8N2N9 1353 aa15.02■□□□□ -0
GFAP-238ENST00000640859 SENP3-EIF4A1A0A087X0R7 540 aa15.02■□□□□ -0
GFAP-238ENST00000640859 PELP1Q8IZL8 1130 aaKnown RBP15.02■□□□□ -0
GFAP-238ENST00000640859 PRAM1Q96QH2 718 aa15.02■□□□□ -0
GFAP-238ENST00000640859 CABP2Q9NPB3 220 aa15.02■□□□□ -0
GFAP-238ENST00000640859 ADAMTS8Q9UP79 889 aa15.02■□□□□ -0
GFAP-238ENST00000640859 CPS1P31327 1500 aa15.02□□□□□ -0.01
GFAP-238ENST00000640859 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
GFAP-238ENST00000640859 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
GFAP-238ENST00000640859 POGKQ9P215 609 aa15.01□□□□□ -0.01
GFAP-238ENST00000640859 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
GFAP-238ENST00000640859 ABCC11Q96J66 1382 aa15□□□□□ -0.01
GFAP-238ENST00000640859 IRX6P78412 446 aaPredicted RBP15□□□□□ -0.01
GFAP-238ENST00000640859 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
GFAP-238ENST00000640859 PROSER2Q86WR7 435 aaPredicted RBP15□□□□□ -0.01
GFAP-238ENST00000640859 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
GFAP-238ENST00000640859 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
GFAP-238ENST00000640859 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
GFAP-238ENST00000640859 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
GFAP-238ENST00000640859 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
GFAP-238ENST00000640859 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
GFAP-238ENST00000640859 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
GFAP-238ENST00000640859 NSD2O96028 1365 aa14.98□□□□□ -0.01
GFAP-238ENST00000640859 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
GFAP-238ENST00000640859 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
GFAP-238ENST00000640859 SIRT1Q96EB6 747 aa14.97□□□□□ -0.01
GFAP-238ENST00000640859 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
GFAP-238ENST00000640859 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.01
GFAP-238ENST00000640859 PPP4R2Q9NY27 417 aa14.96□□□□□ -0.01
GFAP-238ENST00000640859 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
GFAP-238ENST00000640859 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
GFAP-238ENST00000640859 METP08581 1390 aa14.95□□□□□ -0.02
GFAP-238ENST00000640859 PLEKHH1Q9ULM0 1364 aa14.95□□□□□ -0.02
GFAP-238ENST00000640859 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
GFAP-238ENST00000640859 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
GFAP-238ENST00000640859 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
GFAP-238ENST00000640859 TECPR2O15040 1411 aa14.93□□□□□ -0.02
GFAP-238ENST00000640859 TOM1O60784 492 aa14.93□□□□□ -0.02
GFAP-238ENST00000640859 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
GFAP-238ENST00000640859 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
GFAP-238ENST00000640859 MSH6P52701 1360 aa14.93□□□□□ -0.02
GFAP-238ENST00000640859 SHPRHQ149N8 1683 aa14.93□□□□□ -0.02
GFAP-238ENST00000640859 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
GFAP-238ENST00000640859 FAM135BQ49AJ0 1406 aa14.92□□□□□ -0.02
GFAP-238ENST00000640859 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
GFAP-238ENST00000640859 TMEM94Q12767 1356 aa14.92□□□□□ -0.02
GFAP-238ENST00000640859 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms