RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
ERGIC3-220ENST00000640748 QTRT2Q9H974 415 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-220ENST00000640748 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
ERGIC3-220ENST00000640748 ADGRF5Q8IZF2 1346 aa17.36■□□□□ 0.37
ERGIC3-220ENST00000640748 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
ERGIC3-220ENST00000640748 RBM6P78332 1123 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-220ENST00000640748 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
ERGIC3-220ENST00000640748 NGLY1Q96IV0 654 aa17.34■□□□□ 0.37
ERGIC3-220ENST00000640748 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.37
ERGIC3-220ENST00000640748 TECPR2O15040 1411 aa17.32■□□□□ 0.36
ERGIC3-220ENST00000640748 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
ERGIC3-220ENST00000640748 PXDNQ92626 1479 aa17.31■□□□□ 0.36
ERGIC3-220ENST00000640748 FNBP4Q8N3X1 1017 aaPredicted RBP17.31■□□□□ 0.36
ERGIC3-220ENST00000640748 MYOM2P54296 1465 aa17.31■□□□□ 0.36
ERGIC3-220ENST00000640748 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
ERGIC3-220ENST00000640748 LRPPRCP42704 1394 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 USP21Q9UK80 565 aa17.29■□□□□ 0.36
ERGIC3-220ENST00000640748 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 IFT172Q9UG01 1749 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 STK26Q9P289 416 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 ATRNO75882 1429 aa17.28■□□□□ 0.36
ERGIC3-220ENST00000640748 FOXO3O43524 673 aa17.27■□□□□ 0.36
ERGIC3-220ENST00000640748 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
ERGIC3-220ENST00000640748 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
ERGIC3-220ENST00000640748 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
ERGIC3-220ENST00000640748 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
ERGIC3-220ENST00000640748 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
ERGIC3-220ENST00000640748 KNDC1Q76NI1 1749 aa17.24■□□□□ 0.35
ERGIC3-220ENST00000640748 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-220ENST00000640748 SRCAPQ6ZRS2 3230 aa17.23■□□□□ 0.35
ERGIC3-220ENST00000640748 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
ERGIC3-220ENST00000640748 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
ERGIC3-220ENST00000640748 EP400Q96L91 3159 aa17.21■□□□□ 0.35
ERGIC3-220ENST00000640748 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
ERGIC3-220ENST00000640748 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
ERGIC3-220ENST00000640748 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
ERGIC3-220ENST00000640748 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
ERGIC3-220ENST00000640748 MARF1Q9Y4F3 1742 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-220ENST00000640748 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
ERGIC3-220ENST00000640748 SLIT2O94813 1529 aa17.16■□□□□ 0.34
ERGIC3-220ENST00000640748 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
ERGIC3-220ENST00000640748 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-220ENST00000640748 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
ERGIC3-220ENST00000640748 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
ERGIC3-220ENST00000640748 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-220ENST00000640748 GLI3P10071 1580 aa17.14■□□□□ 0.33
ERGIC3-220ENST00000640748 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
ERGIC3-220ENST00000640748 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
ERGIC3-220ENST00000640748 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
ERGIC3-220ENST00000640748 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
ERGIC3-220ENST00000640748 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
ERGIC3-220ENST00000640748 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-220ENST00000640748 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
ERGIC3-220ENST00000640748 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
ERGIC3-220ENST00000640748 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
ERGIC3-220ENST00000640748 DLC1Q96QB1 1528 aa17.1■□□□□ 0.33
ERGIC3-220ENST00000640748 ADGRB1O14514 1584 aa17.1■□□□□ 0.33
ERGIC3-220ENST00000640748 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
ERGIC3-220ENST00000640748 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
ERGIC3-220ENST00000640748 PSME1Q06323 249 aa17.07■□□□□ 0.32
ERGIC3-220ENST00000640748 ADGRB2O60241 1585 aa17.06■□□□□ 0.32
ERGIC3-220ENST00000640748 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
ERGIC3-220ENST00000640748 ABCA3Q99758 1704 aa17.06■□□□□ 0.32
ERGIC3-220ENST00000640748 VPS72Q15906 364 aa17.05■□□□□ 0.32
ERGIC3-220ENST00000640748 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
ERGIC3-220ENST00000640748 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
ERGIC3-220ENST00000640748 FAM83GA6ND36 823 aa17.03■□□□□ 0.32
ERGIC3-220ENST00000640748 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
ERGIC3-220ENST00000640748 POGKQ9P215 609 aa17.03■□□□□ 0.32
ERGIC3-220ENST00000640748 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
ERGIC3-220ENST00000640748 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-220ENST00000640748 NWD2Q9ULI1 1742 aa17.02■□□□□ 0.32
ERGIC3-220ENST00000640748 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-220ENST00000640748 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
ERGIC3-220ENST00000640748 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-220ENST00000640748 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
ERGIC3-220ENST00000640748 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
ERGIC3-220ENST00000640748 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
ERGIC3-220ENST00000640748 MINK1Q8N4C8 1332 aaPredicted RBP16.99■□□□□ 0.31
ERGIC3-220ENST00000640748 DEFB132Q7Z7B7 95 aa16.99■□□□□ 0.31
ERGIC3-220ENST00000640748 ALS2Q96Q42 1657 aa16.99■□□□□ 0.31
ERGIC3-220ENST00000640748 TULP4Q9NRJ4 1543 aa16.99■□□□□ 0.31
ERGIC3-220ENST00000640748 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
ERGIC3-220ENST00000640748 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
ERGIC3-220ENST00000640748 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms