RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 KNSTRNQ9Y448 316 aa12.5□□□□□ -0.41
PAX6-273ENST00000640610 UBE2Q2Q8WVN8 375 aa12.5□□□□□ -0.41
PAX6-273ENST00000640610 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
PAX6-273ENST00000640610 PLIN1O60240 522 aa12.49□□□□□ -0.41
PAX6-273ENST00000640610 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
PAX6-273ENST00000640610 NEXMIFQ5QGS0 1516 aa12.49□□□□□ -0.41
PAX6-273ENST00000640610 BLMP54132 1417 aaPredicted RBP12.49□□□□□ -0.41
PAX6-273ENST00000640610 UBR1Q8IWV7 1749 aa12.49□□□□□ -0.41
PAX6-273ENST00000640610 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
PAX6-273ENST00000640610 A2ML1A8K2U0 1454 aa12.49□□□□□ -0.41
PAX6-273ENST00000640610 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
PAX6-273ENST00000640610 MYOM2P54296 1465 aa12.48□□□□□ -0.41
PAX6-273ENST00000640610 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
PAX6-273ENST00000640610 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
PAX6-273ENST00000640610 KDM5AP29375 1690 aaKnown RBP12.47□□□□□ -0.41
PAX6-273ENST00000640610 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
PAX6-273ENST00000640610 MYOM1P52179 1685 aa12.46□□□□□ -0.41
PAX6-273ENST00000640610 PTPRMP28827 1452 aa12.46□□□□□ -0.41
PAX6-273ENST00000640610 NLRP1Q9C000 1473 aa12.46□□□□□ -0.41
PAX6-273ENST00000640610 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.41
PAX6-273ENST00000640610 NRXN1Q9ULB1 1477 aa12.46□□□□□ -0.42
PAX6-273ENST00000640610 GSE1Q14687 1217 aa12.46□□□□□ -0.42
PAX6-273ENST00000640610 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
PAX6-273ENST00000640610 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
PAX6-273ENST00000640610 PLEKHH1Q9ULM0 1364 aa12.44□□□□□ -0.42
PAX6-273ENST00000640610 KIAA1210Q9ULL0 1709 aa12.44□□□□□ -0.42
PAX6-273ENST00000640610 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
PAX6-273ENST00000640610 CCDC146Q8IYE0 955 aa12.43□□□□□ -0.42
PAX6-273ENST00000640610 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
PAX6-273ENST00000640610 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
PAX6-273ENST00000640610 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
PAX6-273ENST00000640610 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
PAX6-273ENST00000640610 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
PAX6-273ENST00000640610 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
PAX6-273ENST00000640610 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
PAX6-273ENST00000640610 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
PAX6-273ENST00000640610 SKAP1Q86WV1 359 aa12.42□□□□□ -0.42
PAX6-273ENST00000640610 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
PAX6-273ENST00000640610 CEP170BQ9Y4F5 1589 aaPredicted RBP12.42□□□□□ -0.42
PAX6-273ENST00000640610 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
PAX6-273ENST00000640610 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
PAX6-273ENST00000640610 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
PAX6-273ENST00000640610 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
PAX6-273ENST00000640610 ZNF142P52746 1687 aaPredicted RBP12.4□□□□□ -0.42
PAX6-273ENST00000640610 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.42
PAX6-273ENST00000640610 CRBNQ96SW2 442 aa12.4□□□□□ -0.42
PAX6-273ENST00000640610 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
PAX6-273ENST00000640610 INSRP06213 1382 aa12.39□□□□□ -0.43
PAX6-273ENST00000640610 NFKBIBQ15653 356 aa12.39□□□□□ -0.43
PAX6-273ENST00000640610 DUSP27Q5VZP5 1158 aa12.38□□□□□ -0.43
PAX6-273ENST00000640610 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
PAX6-273ENST00000640610 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
PAX6-273ENST00000640610 SLIT1O75093 1534 aa12.37□□□□□ -0.43
PAX6-273ENST00000640610 LTKP29376 864 aa12.37□□□□□ -0.43
PAX6-273ENST00000640610 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
PAX6-273ENST00000640610 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
PAX6-273ENST00000640610 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
PAX6-273ENST00000640610 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
PAX6-273ENST00000640610 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 ADGRB1O14514 1584 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
PAX6-273ENST00000640610 APAF1O14727 1248 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
PAX6-273ENST00000640610 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
PAX6-273ENST00000640610 DAXXQ9UER7 740 aaPredicted RBP12.36□□□□□ -0.43
PAX6-273ENST00000640610 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
PAX6-273ENST00000640610 TXNDC2Q86VQ3 553 aa12.35□□□□□ -0.43
PAX6-273ENST00000640610 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
PAX6-273ENST00000640610 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
PAX6-273ENST00000640610 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
PAX6-273ENST00000640610 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
PAX6-273ENST00000640610 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
PAX6-273ENST00000640610 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
PAX6-273ENST00000640610 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
PAX6-273ENST00000640610 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
PAX6-273ENST00000640610 SAFB2Q14151 953 aaKnown RBP eCLIP12.32□□□□□ -0.44
PAX6-273ENST00000640610 SLFN5Q08AF3 891 aa12.31□□□□□ -0.44
PAX6-273ENST00000640610 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
PAX6-273ENST00000640610 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
PAX6-273ENST00000640610 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
PAX6-273ENST00000640610 ARHGEF28Q8N1W1 1705 aaKnown RBP12.3□□□□□ -0.44
PAX6-273ENST00000640610 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
PAX6-273ENST00000640610 STK26Q9P289 416 aa12.29□□□□□ -0.44
PAX6-273ENST00000640610 METP08581 1390 aa12.29□□□□□ -0.44
PAX6-273ENST00000640610 BCAR3O75815 825 aa12.29□□□□□ -0.44
PAX6-273ENST00000640610 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
PAX6-273ENST00000640610 MORC1Q86VD1 984 aa12.28□□□□□ -0.44
PAX6-273ENST00000640610 ANKLE2Q86XL3 938 aa12.28□□□□□ -0.44
PAX6-273ENST00000640610 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
PAX6-273ENST00000640610 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
PAX6-273ENST00000640610 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
PAX6-273ENST00000640610 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
PAX6-273ENST00000640610 MED14O60244 1454 aa12.28□□□□□ -0.44
PAX6-273ENST00000640610 FAM161AQ3B820 660 aa12.27□□□□□ -0.44
PAX6-273ENST00000640610 CABP2Q9NPB3 220 aa12.27□□□□□ -0.44
PAX6-273ENST00000640610 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
PAX6-273ENST00000640610 CENPQQ7L2Z9 268 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms