RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 ACIN1Q9UKV3 1341 aaKnown RBP27.09■■□□□ 1.93
VPS72-207ENST00000640458 CLTCL1P53675 1640 aa27.06■■□□□ 1.92
VPS72-207ENST00000640458 BCL9LQ86UU0 1499 aa27.06■■□□□ 1.92
VPS72-207ENST00000640458 COL22A1Q8NFW1 1626 aaPredicted RBP27.05■■□□□ 1.92
VPS72-207ENST00000640458 ESCO1Q5FWF5 840 aa27.05■■□□□ 1.92
VPS72-207ENST00000640458 GJD4Q96KN9 370 aaPredicted RBP27.05■■□□□ 1.92
VPS72-207ENST00000640458 MYOM2P54296 1465 aa27.04■■□□□ 1.92
VPS72-207ENST00000640458 VGFO15240 615 aaPredicted RBP27.03■■□□□ 1.92
VPS72-207ENST00000640458 XPCQ01831 940 aaPredicted RBP27.03■■□□□ 1.92
VPS72-207ENST00000640458 NPHP3Q7Z494 1330 aa27.03■■□□□ 1.92
VPS72-207ENST00000640458 EP400Q96L91 3159 aa27.02■■□□□ 1.92
VPS72-207ENST00000640458 MPHOSPH9Q99550 1183 aa27.01■■□□□ 1.91
VPS72-207ENST00000640458 FOXO3O43524 673 aa27■■□□□ 1.91
VPS72-207ENST00000640458 KIF1BO60333 1816 aa26.99■■□□□ 1.91
VPS72-207ENST00000640458 RAB3GAP2Q9H2M9 1393 aa26.98■■□□□ 1.91
VPS72-207ENST00000640458 PXDNQ92626 1479 aa26.96■■□□□ 1.91
VPS72-207ENST00000640458 MARF1Q9Y4F3 1742 aaKnown RBP26.96■■□□□ 1.91
VPS72-207ENST00000640458 BLMP54132 1417 aaPredicted RBP26.95■■□□□ 1.9
VPS72-207ENST00000640458 DEFB132Q7Z7B7 95 aa26.94■■□□□ 1.9
VPS72-207ENST00000640458 UNC5CLQ8IV45 518 aa26.94■■□□□ 1.9
VPS72-207ENST00000640458 PRAG1Q86YV5 1406 aa26.93■■□□□ 1.9
VPS72-207ENST00000640458 NUTM2FA1L443 756 aa26.93■■□□□ 1.9
VPS72-207ENST00000640458 HRCP23327 699 aa26.92■■□□□ 1.9
VPS72-207ENST00000640458 RALGAPBQ86X10 1494 aa26.92■■□□□ 1.9
VPS72-207ENST00000640458 SF3B2Q13435 895 aaKnown RBP26.91■■□□□ 1.9
VPS72-207ENST00000640458 LRPPRCP42704 1394 aaKnown RBP26.9■■□□□ 1.9
VPS72-207ENST00000640458 RPGRIP1LQ68CZ1 1315 aa26.9■■□□□ 1.9
VPS72-207ENST00000640458 CDC42BPGQ6DT37 1551 aa26.89■■□□□ 1.9
VPS72-207ENST00000640458 GLI3P10071 1580 aa26.88■■□□□ 1.89
VPS72-207ENST00000640458 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.87■■□□□ 1.89
VPS72-207ENST00000640458 SLIT2O94813 1529 aa26.86■■□□□ 1.89
VPS72-207ENST00000640458 SEPT12Q8IYM1 358 aa26.86■■□□□ 1.89
VPS72-207ENST00000640458 STK26Q9P289 416 aa26.86■■□□□ 1.89
VPS72-207ENST00000640458 WAPLQ7Z5K2 1190 aa26.85■■□□□ 1.89
VPS72-207ENST00000640458 BRWD3Q6RI45 1802 aa26.83■■□□□ 1.89
VPS72-207ENST00000640458 SPATA31A3Q5VYP0 1347 aa26.83■■□□□ 1.89
VPS72-207ENST00000640458 HAP1P54257 671 aaPredicted RBP26.82■■□□□ 1.88
VPS72-207ENST00000640458 CCDC144AA2RUR9 1427 aa26.82■■□□□ 1.88
VPS72-207ENST00000640458 CCDC9Q9Y3X0 531 aaKnown RBP26.81■■□□□ 1.88
VPS72-207ENST00000640458 PLEKHG5O94827 1062 aa26.8■■□□□ 1.88
VPS72-207ENST00000640458 PPLO60437 1756 aa26.79■■□□□ 1.88
VPS72-207ENST00000640458 KRT28Q7Z3Y7 464 aa26.79■■□□□ 1.88
VPS72-207ENST00000640458 PSDA5PKW4 1024 aaPredicted RBP26.78■■□□□ 1.88
VPS72-207ENST00000640458 VPS72Q15906 364 aa26.77■■□□□ 1.88
VPS72-207ENST00000640458 KRT27Q7Z3Y8 459 aa26.77■■□□□ 1.88
VPS72-207ENST00000640458 LRP5O75197 1615 aa26.76■■□□□ 1.87
VPS72-207ENST00000640458 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
VPS72-207ENST00000640458 ADGRF5Q8IZF2 1346 aa26.76■■□□□ 1.87
VPS72-207ENST00000640458 CABLES1Q8TDN4 633 aa26.76■■□□□ 1.87
VPS72-207ENST00000640458 PLEKHH1Q9ULM0 1364 aa26.74■■□□□ 1.87
VPS72-207ENST00000640458 TMEM132EQ6IEE7 984 aa26.73■■□□□ 1.87
VPS72-207ENST00000640458 SPATA31E1Q6ZUB1 1445 aa26.73■■□□□ 1.87
VPS72-207ENST00000640458 A0A0G2JS52 829 aa26.72■■□□□ 1.87
VPS72-207ENST00000640458 ONECUT3O60422 494 aaPredicted RBP26.72■■□□□ 1.87
VPS72-207ENST00000640458 BAG6P46379 1132 aa26.72■■□□□ 1.87
VPS72-207ENST00000640458 MYT1Q01538 1121 aa26.72■■□□□ 1.87
VPS72-207ENST00000640458 LMOD2Q6P5Q4 547 aa26.71■■□□□ 1.87
VPS72-207ENST00000640458 TECPR2O15040 1411 aa26.71■■□□□ 1.87
VPS72-207ENST00000640458 KIF1AQ12756 1690 aa26.7■■□□□ 1.87
VPS72-207ENST00000640458 PSME1Q06323 249 aa26.7■■□□□ 1.86
VPS72-207ENST00000640458 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
VPS72-207ENST00000640458 ABCC11Q96J66 1382 aa26.69■■□□□ 1.86
VPS72-207ENST00000640458 ANKRD30BQ9BXX2 1392 aa26.69■■□□□ 1.86
VPS72-207ENST00000640458 FMN2Q9NZ56 1722 aa26.68■■□□□ 1.86
VPS72-207ENST00000640458 TNS3Q68CZ2 1445 aa26.68■■□□□ 1.86
VPS72-207ENST00000640458 PHF8Q9UPP1 1060 aa26.68■■□□□ 1.86
VPS72-207ENST00000640458 PLCH1Q4KWH8 1693 aa26.66■■□□□ 1.86
VPS72-207ENST00000640458 FAM83GA6ND36 823 aa26.64■■□□□ 1.86
VPS72-207ENST00000640458 FAM98CQ17RN3 349 aaKnown RBP26.64■■□□□ 1.86
VPS72-207ENST00000640458 NWD2Q9ULI1 1742 aa26.64■■□□□ 1.85
VPS72-207ENST00000640458 EN1Q05925 392 aaPredicted RBP26.62■■□□□ 1.85
VPS72-207ENST00000640458 YTHDC2Q9H6S0 1430 aaKnown RBP26.61■■□□□ 1.85
VPS72-207ENST00000640458 SBNO1A3KN83 1393 aa26.6■■□□□ 1.85
VPS72-207ENST00000640458 KNDC1Q76NI1 1749 aa26.6■■□□□ 1.85
VPS72-207ENST00000640458 RGPD8O14715 1765 aaPredicted RBP26.6■■□□□ 1.85
VPS72-207ENST00000640458 ARHGEF10O15013 1369 aa26.59■■□□□ 1.85
VPS72-207ENST00000640458 R3HDM1Q15032 1099 aaKnown RBP26.59■■□□□ 1.85
VPS72-207ENST00000640458 FAM182BQ5T319 152 aa26.58■■□□□ 1.85
VPS72-207ENST00000640458 BTG4Q9NY30 223 aa26.57■■□□□ 1.84
VPS72-207ENST00000640458 TRIM26Q12899 539 aaPredicted RBP26.56■■□□□ 1.84
VPS72-207ENST00000640458 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
VPS72-207ENST00000640458 ABCA3Q99758 1704 aa26.56■■□□□ 1.84
VPS72-207ENST00000640458 IFT172Q9UG01 1749 aa26.56■■□□□ 1.84
VPS72-207ENST00000640458 SAFB2Q14151 953 aaKnown RBP eCLIP26.55■■□□□ 1.84
VPS72-207ENST00000640458 PMFBP1Q8TBY8 1022 aa26.55■■□□□ 1.84
VPS72-207ENST00000640458 NRXN1Q9ULB1 1477 aa26.55■■□□□ 1.84
VPS72-207ENST00000640458 PIK3C2GO75747 1445 aa26.54■■□□□ 1.84
VPS72-207ENST00000640458 RGPD1P0DJD0 1748 aa26.5■■□□□ 1.83
VPS72-207ENST00000640458 NRAPQ86VF7 1730 aa26.5■■□□□ 1.83
VPS72-207ENST00000640458 PRAM1Q96QH2 718 aa26.49■■□□□ 1.83
VPS72-207ENST00000640458 EZH2Q15910 746 aaKnown RBP26.48■■□□□ 1.83
VPS72-207ENST00000640458 C14orf93Q9H972 538 aaKnown RBP26.48■■□□□ 1.83
VPS72-207ENST00000640458 DHX57Q6P158 1386 aaKnown RBP26.47■■□□□ 1.83
VPS72-207ENST00000640458 SPATA31A5Q5VU36 1347 aa26.46■■□□□ 1.83
VPS72-207ENST00000640458 SPATA31A7Q8IWB4 1347 aa26.46■■□□□ 1.83
VPS72-207ENST00000640458 CFAP70Q5T0N1 1121 aa26.46■■□□□ 1.83
VPS72-207ENST00000640458 POGKQ9P215 609 aa26.45■■□□□ 1.82
VPS72-207ENST00000640458 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
VPS72-207ENST00000640458 COL14A1Q05707 1796 aaKnown RBP26.43■■□□□ 1.82
VPS72-207ENST00000640458 DISP2A7MBM2 1401 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms