RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	IFFO2	Q5TF58	517 aa		12.23	□□□□□ -0.45
PAX6-267	ENST00000640251	HLA-C	Q95604	372 aa		12.23	□□□□□ -0.45
PAX6-267	ENST00000640251	SLC27A5	Q9Y2P5	690 aa		12.23	□□□□□ -0.45
PAX6-267	ENST00000640251	TOP2A	P11388	1531 aa	Known RBP	12.22	□□□□□ -0.45
PAX6-267	ENST00000640251	SPIRE2	Q8WWL2	714 aa		12.22	□□□□□ -0.45
PAX6-267	ENST00000640251	KDM4C	Q9H3R0	1056 aa		12.22	□□□□□ -0.45
PAX6-267	ENST00000640251	MRC2	Q9UBG0	1479 aa		12.21	□□□□□ -0.45
PAX6-267	ENST00000640251	HOXA2	O43364	376 aa		12.2	□□□□□ -0.46
PAX6-267	ENST00000640251	USP46	P62068	366 aa		12.2	□□□□□ -0.46
PAX6-267	ENST00000640251	GUCA2A	Q02747	115 aa		12.2	□□□□□ -0.46
PAX6-267	ENST00000640251	NEUROD2	Q15784	382 aa		12.2	□□□□□ -0.46
PAX6-267	ENST00000640251	FANCD2	Q9BXW9	1451 aa		12.19	□□□□□ -0.46
PAX6-267	ENST00000640251	WDR62	O43379	1518 aa		12.17	□□□□□ -0.46
PAX6-267	ENST00000640251		A0A0G2JS52	829 aa		12.17	□□□□□ -0.46
PAX6-267	ENST00000640251	NDUFV2	P19404	249 aa		12.17	□□□□□ -0.46
PAX6-267	ENST00000640251	TBC1D2	Q9BYX2	928 aa		12.17	□□□□□ -0.46
PAX6-267	ENST00000640251	CEP164	Q9UPV0	1460 aa		12.16	□□□□□ -0.46
PAX6-267	ENST00000640251	SPSB2	Q99619	263 aa		12.16	□□□□□ -0.46
PAX6-267	ENST00000640251	CFTR	P13569	1480 aa		12.15	□□□□□ -0.46
PAX6-267	ENST00000640251	MOXD2P	A6NHM9	499 aa		12.15	□□□□□ -0.46
PAX6-267	ENST00000640251	RNF19B	Q6ZMZ0	732 aa		12.15	□□□□□ -0.46
PAX6-267	ENST00000640251	FMNL1	O95466	1100 aa	Predicted RBP	12.14	□□□□□ -0.47
PAX6-267	ENST00000640251	ADH1B	P00325	375 aa		12.14	□□□□□ -0.47
PAX6-267	ENST00000640251	PPP1R18	Q6NYC8	613 aa		12.14	□□□□□ -0.47
PAX6-267	ENST00000640251	FAM117A	Q9C073	453 aa		12.14	□□□□□ -0.47
PAX6-267	ENST00000640251	URB2	Q14146	1524 aa	Known RBP	12.14	□□□□□ -0.47
PAX6-267	ENST00000640251	CCDC88B	A6NC98	1476 aa		12.14	□□□□□ -0.47
PAX6-267	ENST00000640251	FDX1	P10109	184 aa		12.13	□□□□□ -0.47
PAX6-267	ENST00000640251	THAP11	Q96EK4	314 aa		12.13	□□□□□ -0.47
PAX6-267	ENST00000640251	BRPF1	P55201	1214 aa	Predicted RBP	12.12	□□□□□ -0.47
PAX6-267	ENST00000640251		Q3C1V9	767 aa		12.12	□□□□□ -0.47
PAX6-267	ENST00000640251	BRICD5	Q6PL45	260 aa		12.12	□□□□□ -0.47
PAX6-267	ENST00000640251	S1PR4	O95977	384 aa		12.11	□□□□□ -0.47
PAX6-267	ENST00000640251	DIXDC1	Q155Q3	683 aa		12.11	□□□□□ -0.47
PAX6-267	ENST00000640251	SYMPK	Q92797	1274 aa	Known RBP	12.11	□□□□□ -0.47
PAX6-267	ENST00000640251	PCDHGC3	Q9UN70	934 aa		12.11	□□□□□ -0.47
PAX6-267	ENST00000640251	SLC6A16	Q9GZN6	736 aa		12.1	□□□□□ -0.47
PAX6-267	ENST00000640251	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.1	□□□□□ -0.47
PAX6-267	ENST00000640251	GGCX	P38435	758 aa		12.09	□□□□□ -0.47
PAX6-267	ENST00000640251	SALL2	Q9Y467	1007 aa	Predicted RBP	12.09	□□□□□ -0.47
PAX6-267	ENST00000640251	PPEF1	O14829	653 aa	Predicted RBP	12.08	□□□□□ -0.48
PAX6-267	ENST00000640251	MYSM1	Q5VVJ2	828 aa		12.08	□□□□□ -0.48
PAX6-267	ENST00000640251	RIC3	Q7Z5B4	369 aa		12.08	□□□□□ -0.48
PAX6-267	ENST00000640251	FAM160A2	Q8N612	972 aa	Predicted RBP	12.08	□□□□□ -0.48
PAX6-267	ENST00000640251	C6orf229	H3BNL8	230 aa		12.07	□□□□□ -0.48
PAX6-267	ENST00000640251	CSPP1	Q1MSJ5	1256 aa		12.07	□□□□□ -0.48
PAX6-267	ENST00000640251	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.07	□□□□□ -0.48
PAX6-267	ENST00000640251	DDRGK1	Q96HY6	314 aa		12.07	□□□□□ -0.48
PAX6-267	ENST00000640251	IL27	Q8NEV9	243 aa		12.06	□□□□□ -0.48
PAX6-267	ENST00000640251	PRDM9	Q9NQV7	894 aa		12.06	□□□□□ -0.48
PAX6-267	ENST00000640251	POLR3E	Q9NVU0	708 aa		12.06	□□□□□ -0.48
PAX6-267	ENST00000640251	PCDHB15	Q9Y5E8	787 aa		12.06	□□□□□ -0.48
PAX6-267	ENST00000640251	PLEKHG3	A1L390	1219 aa		12.05	□□□□□ -0.48
PAX6-267	ENST00000640251	RNF223	E7ERA6	249 aa		12.05	□□□□□ -0.48
PAX6-267	ENST00000640251	USB1	Q9BQ65	265 aa	Known RBP	12.05	□□□□□ -0.48
PAX6-267	ENST00000640251	RSPH6A	Q9H0K4	717 aa		12.05	□□□□□ -0.48
PAX6-267	ENST00000640251	PRDM2	Q13029	1718 aa		12.05	□□□□□ -0.48
PAX6-267	ENST00000640251	SPTLC1	O15269	473 aa		12.04	□□□□□ -0.48
PAX6-267	ENST00000640251	LIMD1	Q9UGP4	676 aa		12.04	□□□□□ -0.48
PAX6-267	ENST00000640251	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.03	□□□□□ -0.48
PAX6-267	ENST00000640251	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.02	□□□□□ -0.48
PAX6-267	ENST00000640251	MSS51	Q4VC12	460 aa		12.01	□□□□□ -0.49
PAX6-267	ENST00000640251	GJA5	P36382	358 aa		12	□□□□□ -0.49
PAX6-267	ENST00000640251	CLK2	P49760	499 aa	Known RBP	12	□□□□□ -0.49
PAX6-267	ENST00000640251	MTMR2	Q13614	643 aa		12	□□□□□ -0.49
PAX6-267	ENST00000640251	RETREG3	Q86VR2	466 aa		12	□□□□□ -0.49
PAX6-267	ENST00000640251	CABLES1	Q8TDN4	633 aa		12	□□□□□ -0.49
PAX6-267	ENST00000640251	TOPBP1	Q92547	1522 aa		11.98	□□□□□ -0.49
PAX6-267	ENST00000640251	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	NUTM2E	B1AL46	878 aa	Predicted RBP	11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	HRC	P23327	699 aa		11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	SKIV2L	Q15477	1246 aa	Known RBP	11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	SH3D19	Q5HYK7	790 aa		11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	ANKLE1	Q8NAG6	615 aa		11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	PRR7	Q8TB68	274 aa		11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	ZBTB3	Q9H5J0	574 aa		11.97	□□□□□ -0.49
PAX6-267	ENST00000640251	QPCT	Q16769	361 aa		11.96	□□□□□ -0.49
PAX6-267	ENST00000640251	PRKD2	Q9BZL6	878 aa		11.96	□□□□□ -0.49
PAX6-267	ENST00000640251	FCF1	Q9Y324	198 aa	Known RBP	11.96	□□□□□ -0.49
PAX6-267	ENST00000640251	SPDYE5	A6NIY4	337 aa		11.94	□□□□□ -0.5
PAX6-267	ENST00000640251	RGS20	O76081	388 aa		11.94	□□□□□ -0.5
PAX6-267	ENST00000640251	JUND	P17535	347 aa		11.94	□□□□□ -0.5
PAX6-267	ENST00000640251	MMP16	P51512	607 aa		11.94	□□□□□ -0.5
PAX6-267	ENST00000640251	PLA2G2C	Q5R387	149 aa		11.94	□□□□□ -0.5
PAX6-267	ENST00000640251	DXO	O77932	396 aa	Known RBP	11.93	□□□□□ -0.5
PAX6-267	ENST00000640251	PRPF38B	Q5VTL8	546 aa	Known RBP	11.93	□□□□□ -0.5
PAX6-267	ENST00000640251	CCDC24	Q8N4L8	307 aa		11.93	□□□□□ -0.5
PAX6-267	ENST00000640251	CFAP99	D6REC4	459 aa		11.92	□□□□□ -0.5
PAX6-267	ENST00000640251	SUPT5H	O00267	1087 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-267	ENST00000640251	LILRB3	O75022	631 aa		11.92	□□□□□ -0.5
PAX6-267	ENST00000640251	TUSC1	Q2TAM9	212 aa		11.92	□□□□□ -0.5
PAX6-267	ENST00000640251	TSC1	Q92574	1164 aa		11.92	□□□□□ -0.5
PAX6-267	ENST00000640251	SLC19A1	P41440	591 aa		11.91	□□□□□ -0.5
PAX6-267	ENST00000640251	RTL5	Q5HYW3	569 aa	Predicted RBP	11.91	□□□□□ -0.5
PAX6-267	ENST00000640251	AQR	O60306	1485 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
PAX6-267	ENST00000640251	RAD54L2	Q9Y4B4	1467 aa		11.9	□□□□□ -0.5
PAX6-267	ENST00000640251	DNMBP	Q6XZF7	1577 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms