RNA–Protein interactions for RNA: ENST00000640119.1

HNRNPU-225, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-225ENST00000640119 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
HNRNPU-225ENST00000640119 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
HNRNPU-225ENST00000640119 WAPLQ7Z5K2 1190 aa17.11■□□□□ 0.33
HNRNPU-225ENST00000640119 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
HNRNPU-225ENST00000640119 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-225ENST00000640119 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
HNRNPU-225ENST00000640119 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
HNRNPU-225ENST00000640119 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
HNRNPU-225ENST00000640119 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
HNRNPU-225ENST00000640119 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
HNRNPU-225ENST00000640119 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
HNRNPU-225ENST00000640119 LRP6O75581 1613 aa17.04■□□□□ 0.32
HNRNPU-225ENST00000640119 JCADQ9P266 1359 aa17.03■□□□□ 0.32
HNRNPU-225ENST00000640119 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
HNRNPU-225ENST00000640119 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
HNRNPU-225ENST00000640119 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
HNRNPU-225ENST00000640119 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
HNRNPU-225ENST00000640119 ORAI2Q96SN7 254 aa17.02■□□□□ 0.32
HNRNPU-225ENST00000640119 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
HNRNPU-225ENST00000640119 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
HNRNPU-225ENST00000640119 TRAK1Q9UPV9 953 aa17■□□□□ 0.31
HNRNPU-225ENST00000640119 PXDNQ92626 1479 aa16.99■□□□□ 0.31
HNRNPU-225ENST00000640119 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
HNRNPU-225ENST00000640119 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
HNRNPU-225ENST00000640119 NEUROD1Q13562 356 aa16.97■□□□□ 0.31
HNRNPU-225ENST00000640119 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
HNRNPU-225ENST00000640119 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
HNRNPU-225ENST00000640119 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.31
HNRNPU-225ENST00000640119 PNPLA6Q8IY17 1366 aa16.96■□□□□ 0.31
HNRNPU-225ENST00000640119 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.3
HNRNPU-225ENST00000640119 TOPAZ1Q8N9V7 1692 aa16.95■□□□□ 0.3
HNRNPU-225ENST00000640119 POGKQ9P215 609 aa16.95■□□□□ 0.3
HNRNPU-225ENST00000640119 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
HNRNPU-225ENST00000640119 ITSN1Q15811 1721 aa16.94■□□□□ 0.3
HNRNPU-225ENST00000640119 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
HNRNPU-225ENST00000640119 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
HNRNPU-225ENST00000640119 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
HNRNPU-225ENST00000640119 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
HNRNPU-225ENST00000640119 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
HNRNPU-225ENST00000640119 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
HNRNPU-225ENST00000640119 TRPM3Q9HCF6 1732 aaPredicted RBP16.92■□□□□ 0.3
HNRNPU-225ENST00000640119 PRR36Q9H6K5 1346 aa16.92■□□□□ 0.3
HNRNPU-225ENST00000640119 ATP7BP35670 1465 aa16.92■□□□□ 0.3
HNRNPU-225ENST00000640119 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
HNRNPU-225ENST00000640119 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
HNRNPU-225ENST00000640119 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-225ENST00000640119 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
HNRNPU-225ENST00000640119 FOXO3O43524 673 aa16.89■□□□□ 0.29
HNRNPU-225ENST00000640119 XPCQ01831 940 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-225ENST00000640119 LRRC59Q96AG4 307 aaKnown RBP16.89■□□□□ 0.29
HNRNPU-225ENST00000640119 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
HNRNPU-225ENST00000640119 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
HNRNPU-225ENST00000640119 WASLO00401 505 aaPredicted RBP16.87■□□□□ 0.29
HNRNPU-225ENST00000640119 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
HNRNPU-225ENST00000640119 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
HNRNPU-225ENST00000640119 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-225ENST00000640119 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
HNRNPU-225ENST00000640119 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-225ENST00000640119 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-225ENST00000640119 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-225ENST00000640119 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
HNRNPU-225ENST00000640119 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
HNRNPU-225ENST00000640119 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
HNRNPU-225ENST00000640119 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
HNRNPU-225ENST00000640119 TNS3Q68CZ2 1445 aa16.84■□□□□ 0.29
HNRNPU-225ENST00000640119 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.28
HNRNPU-225ENST00000640119 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
HNRNPU-225ENST00000640119 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
HNRNPU-225ENST00000640119 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
HNRNPU-225ENST00000640119 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-225ENST00000640119 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
HNRNPU-225ENST00000640119 CDK19Q9BWU1 502 aa16.8■□□□□ 0.28
HNRNPU-225ENST00000640119 NUDT16Q96DE0 195 aaKnown RBP16.79■□□□□ 0.28
HNRNPU-225ENST00000640119 AFF2P51816 1311 aa16.77■□□□□ 0.28
HNRNPU-225ENST00000640119 SOCS7O14512 581 aa16.77■□□□□ 0.28
HNRNPU-225ENST00000640119 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.27
HNRNPU-225ENST00000640119 PLCH1Q4KWH8 1693 aa16.76■□□□□ 0.27
HNRNPU-225ENST00000640119 ADAMTS2O95450 1211 aa16.76■□□□□ 0.27
HNRNPU-225ENST00000640119 C8orf37Q96NL8 207 aa16.76■□□□□ 0.27
HNRNPU-225ENST00000640119 PHRF1Q9P1Y6 1649 aaKnown RBP16.76■□□□□ 0.27
HNRNPU-225ENST00000640119 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
HNRNPU-225ENST00000640119 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
HNRNPU-225ENST00000640119 PPIP5K1Q6PFW1 1433 aa16.74■□□□□ 0.27
HNRNPU-225ENST00000640119 SBNO2Q9Y2G9 1366 aa16.74■□□□□ 0.27
HNRNPU-225ENST00000640119 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
HNRNPU-225ENST00000640119 PSME1Q06323 249 aa16.73■□□□□ 0.27
HNRNPU-225ENST00000640119 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
HNRNPU-225ENST00000640119 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
HNRNPU-225ENST00000640119 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
HNRNPU-225ENST00000640119 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
HNRNPU-225ENST00000640119 NRAPQ86VF7 1730 aa16.72■□□□□ 0.27
HNRNPU-225ENST00000640119 NWD2Q9ULI1 1742 aa16.72■□□□□ 0.27
HNRNPU-225ENST00000640119 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
HNRNPU-225ENST00000640119 ACEP12821 1306 aa16.71■□□□□ 0.27
HNRNPU-225ENST00000640119 PLEKHG3A1L390 1219 aa16.71■□□□□ 0.27
HNRNPU-225ENST00000640119 ZNF772Q68DY9 489 aaPredicted RBP16.71■□□□□ 0.27
HNRNPU-225ENST00000640119 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
HNRNPU-225ENST00000640119 SLIT2O94813 1529 aa16.7■□□□□ 0.26
HNRNPU-225ENST00000640119 MON2Q7Z3U7 1717 aa16.7■□□□□ 0.26
HNRNPU-225ENST00000640119 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms