RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TMEM259Q4ZIN3 620 aa10.63□□□□□ -0.71
NECAP1-220ENST00000639841 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
NECAP1-220ENST00000639841 DSG2Q14126 1118 aa10.63□□□□□ -0.71
NECAP1-220ENST00000639841 CLEC11AQ9Y240 323 aa10.63□□□□□ -0.71
NECAP1-220ENST00000639841 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
NECAP1-220ENST00000639841 HECW2Q9P2P5 1572 aa10.62□□□□□ -0.71
NECAP1-220ENST00000639841 PPP2R2DQ66LE6 453 aa10.61□□□□□ -0.71
NECAP1-220ENST00000639841 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
NECAP1-220ENST00000639841 ILDR1Q86SU0 546 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-220ENST00000639841 ANKRD13AQ8IZ07 590 aa10.59□□□□□ -0.71
NECAP1-220ENST00000639841 SIRT1Q96EB6 747 aa10.59□□□□□ -0.71
NECAP1-220ENST00000639841 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-220ENST00000639841 ARAP3Q8WWN8 1544 aa10.58□□□□□ -0.72
NECAP1-220ENST00000639841 ABCA8O94911 1581 aa10.58□□□□□ -0.72
NECAP1-220ENST00000639841 CD109Q6YHK3 1445 aa10.58□□□□□ -0.72
NECAP1-220ENST00000639841 KDM4AO75164 1064 aa10.57□□□□□ -0.72
NECAP1-220ENST00000639841 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
NECAP1-220ENST00000639841 SOCS7O14512 581 aa10.56□□□□□ -0.72
NECAP1-220ENST00000639841 ATG7O95352 703 aa10.56□□□□□ -0.72
NECAP1-220ENST00000639841 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-220ENST00000639841 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
NECAP1-220ENST00000639841 ZC3H4Q9UPT8 1303 aaKnown RBP10.56□□□□□ -0.72
NECAP1-220ENST00000639841 COL17A1Q9UMD9 1497 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-220ENST00000639841 PALM3A6NDB9 673 aaPredicted RBP10.56□□□□□ -0.72
NECAP1-220ENST00000639841 ERCC3P19447 782 aa10.56□□□□□ -0.72
NECAP1-220ENST00000639841 TSR1Q2NL82 804 aaKnown RBP10.56□□□□□ -0.72
NECAP1-220ENST00000639841 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
NECAP1-220ENST00000639841 NCLP19338 710 aaKnown RBP10.54□□□□□ -0.72
NECAP1-220ENST00000639841 UBXN4Q92575 508 aa10.54□□□□□ -0.72
NECAP1-220ENST00000639841 LMOD1P29536 600 aaPredicted RBP10.54□□□□□ -0.72
NECAP1-220ENST00000639841 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
NECAP1-220ENST00000639841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.72
NECAP1-220ENST00000639841 GIPC2Q8TF65 315 aa10.53□□□□□ -0.72
NECAP1-220ENST00000639841 NEO1Q92859 1461 aa10.52□□□□□ -0.72
NECAP1-220ENST00000639841 ANKRD62A6NC57 917 aa10.52□□□□□ -0.72
NECAP1-220ENST00000639841 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.72
NECAP1-220ENST00000639841 ZNF592Q92610 1267 aa10.52□□□□□ -0.72
NECAP1-220ENST00000639841 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.72
NECAP1-220ENST00000639841 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.72
NECAP1-220ENST00000639841 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
NECAP1-220ENST00000639841 BRPF3Q9ULD4 1205 aa10.52□□□□□ -0.73
NECAP1-220ENST00000639841 ABCA9Q8IUA7 1624 aa10.52□□□□□ -0.73
NECAP1-220ENST00000639841 PHLDB3Q6NSJ2 640 aa10.51□□□□□ -0.73
NECAP1-220ENST00000639841 DDX12PQ92771 950 aa10.51□□□□□ -0.73
NECAP1-220ENST00000639841 HIRIP3Q9BW71 556 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-220ENST00000639841 PPP1R1BQ9UD71 204 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-220ENST00000639841 CFAP74Q9C0B2 1584 aa10.5□□□□□ -0.73
NECAP1-220ENST00000639841 GABBR2O75899 941 aa10.5□□□□□ -0.73
NECAP1-220ENST00000639841 UCN2Q96RP3 112 aa10.5□□□□□ -0.73
NECAP1-220ENST00000639841 PTGER2P43116 358 aa10.5□□□□□ -0.73
NECAP1-220ENST00000639841 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
NECAP1-220ENST00000639841 NLRP7Q8WX94 980 aa10.49□□□□□ -0.73
NECAP1-220ENST00000639841 PRM3Q9NNZ6 103 aa10.49□□□□□ -0.73
NECAP1-220ENST00000639841 KIF21BO75037 1637 aa10.49□□□□□ -0.73
NECAP1-220ENST00000639841 ADAMTSL3P82987 1691 aa10.49□□□□□ -0.73
NECAP1-220ENST00000639841 GPR37L1O60883 481 aa10.48□□□□□ -0.73
NECAP1-220ENST00000639841 FOXK1P85037 733 aa10.48□□□□□ -0.73
NECAP1-220ENST00000639841 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
NECAP1-220ENST00000639841 NAALADL2Q58DX5 795 aa10.48□□□□□ -0.73
NECAP1-220ENST00000639841 CC2D2BQ6DHV5 1058 aa10.48□□□□□ -0.73
NECAP1-220ENST00000639841 ZNF662Q6ZS27 426 aa10.48□□□□□ -0.73
NECAP1-220ENST00000639841 TFIP11Q9UBB9 837 aaKnown RBP10.48□□□□□ -0.73
NECAP1-220ENST00000639841 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
NECAP1-220ENST00000639841 NPDC1Q9NQX5 325 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-220ENST00000639841 VAMP1P23763 118 aa10.46□□□□□ -0.74
NECAP1-220ENST00000639841 GJD4Q96KN9 370 aaPredicted RBP10.46□□□□□ -0.74
NECAP1-220ENST00000639841 ALG2Q9H553 416 aa10.46□□□□□ -0.74
NECAP1-220ENST00000639841 PTPRMP28827 1452 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 MAP3K13O43283 966 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 BCORL1Q5H9F3 1711 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 POGZQ7Z3K3 1410 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 NPAS4Q8IUM7 802 aa10.45□□□□□ -0.74
NECAP1-220ENST00000639841 SAMD9Q5K651 1589 aa10.44□□□□□ -0.74
NECAP1-220ENST00000639841 RAPGEF6Q8TEU7 1601 aa10.44□□□□□ -0.74
NECAP1-220ENST00000639841 POTEMA6NI47 508 aa10.44□□□□□ -0.74
NECAP1-220ENST00000639841 RECKO95980 971 aa10.44□□□□□ -0.74
NECAP1-220ENST00000639841 TMED8Q6PL24 325 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-220ENST00000639841 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
NECAP1-220ENST00000639841 PCF11O94913 1555 aaKnown RBP10.44□□□□□ -0.74
NECAP1-220ENST00000639841 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
NECAP1-220ENST00000639841 PSMD1Q99460 953 aa10.43□□□□□ -0.74
NECAP1-220ENST00000639841 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
NECAP1-220ENST00000639841 ATP10BO94823 1461 aa10.42□□□□□ -0.74
NECAP1-220ENST00000639841 C7P10643 843 aa10.42□□□□□ -0.74
NECAP1-220ENST00000639841 VAC14Q08AM6 782 aa10.42□□□□□ -0.74
NECAP1-220ENST00000639841 SF3A1Q15459 793 aaKnown RBP10.42□□□□□ -0.74
NECAP1-220ENST00000639841 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
NECAP1-220ENST00000639841 KCNH8Q96L42 1107 aa10.42□□□□□ -0.74
NECAP1-220ENST00000639841 MAFBQ9Y5Q3 323 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-220ENST00000639841 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
NECAP1-220ENST00000639841 EEA1Q15075 1411 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 MARCH6O60337 910 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 NOL8Q76FK4 1167 aaKnown RBP10.41□□□□□ -0.74
NECAP1-220ENST00000639841 PLPP6Q8IY26 295 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 ZNF710Q8N1W2 664 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 FANCAO15360 1455 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms