RNA–Protein interactions for RNA: ENST00000639555.1

NPAS4-204, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 5 BASIC

Gene NPAS4, Length 878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-204ENST00000639555 DLC1Q96QB1 1528 aa24.78■■□□□ 1.56
NPAS4-204ENST00000639555 XIRP1Q702N8 1843 aaKnown RBP24.78■■□□□ 1.56
NPAS4-204ENST00000639555 CARD11Q9BXL7 1154 aa24.77■■□□□ 1.56
NPAS4-204ENST00000639555 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
NPAS4-204ENST00000639555 PLEKHH1Q9ULM0 1364 aa24.75■■□□□ 1.55
NPAS4-204ENST00000639555 EIF3AQ14152 1382 aaKnown RBP24.73■■□□□ 1.55
NPAS4-204ENST00000639555 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.72■■□□□ 1.55
NPAS4-204ENST00000639555 CENPJQ9HC77 1338 aaPredicted RBP24.71■■□□□ 1.55
NPAS4-204ENST00000639555 MINK1Q8N4C8 1332 aaPredicted RBP24.7■■□□□ 1.54
NPAS4-204ENST00000639555 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
NPAS4-204ENST00000639555 TRPM1Q7Z4N2 1603 aa24.68■■□□□ 1.54
NPAS4-204ENST00000639555 SLC24A1O60721 1099 aa24.67■■□□□ 1.54
NPAS4-204ENST00000639555 HIRIP3Q9BW71 556 aaPredicted RBP24.67■■□□□ 1.54
NPAS4-204ENST00000639555 RALGAPBQ86X10 1494 aa24.66■■□□□ 1.54
NPAS4-204ENST00000639555 WASLO00401 505 aaPredicted RBP24.66■■□□□ 1.54
NPAS4-204ENST00000639555 ESCO1Q5FWF5 840 aa24.66■■□□□ 1.54
NPAS4-204ENST00000639555 MST1RQ04912 1400 aa24.65■■□□□ 1.54
NPAS4-204ENST00000639555 NUTM2FA1L443 756 aa24.64■■□□□ 1.54
NPAS4-204ENST00000639555 HSPA1LP34931 641 aa24.64■■□□□ 1.54
NPAS4-204ENST00000639555 BRINP3Q76B58 766 aa24.64■■□□□ 1.54
NPAS4-204ENST00000639555 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.53
NPAS4-204ENST00000639555 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.53
NPAS4-204ENST00000639555 CDC42BPGQ6DT37 1551 aa24.63■■□□□ 1.53
NPAS4-204ENST00000639555 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
NPAS4-204ENST00000639555 CDK19Q9BWU1 502 aa24.6■■□□□ 1.53
NPAS4-204ENST00000639555 EVC2Q86UK5 1308 aa24.59■■□□□ 1.53
NPAS4-204ENST00000639555 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
NPAS4-204ENST00000639555 ARHGEF28Q8N1W1 1705 aaKnown RBP24.57■■□□□ 1.52
NPAS4-204ENST00000639555 ROBO1Q9Y6N7 1651 aa24.56■■□□□ 1.52
NPAS4-204ENST00000639555 PHF8Q9UPP1 1060 aa24.56■■□□□ 1.52
NPAS4-204ENST00000639555 ANKARQ7Z5J8 1434 aa24.55■■□□□ 1.52
NPAS4-204ENST00000639555 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
NPAS4-204ENST00000639555 NPHP3Q7Z494 1330 aa24.55■■□□□ 1.52
NPAS4-204ENST00000639555 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
NPAS4-204ENST00000639555 CCDC61Q9Y6R9 512 aa24.54■■□□□ 1.52
NPAS4-204ENST00000639555 ADGRB2O60241 1585 aa24.53■■□□□ 1.52
NPAS4-204ENST00000639555 ST20-MTHFSA0A0A6YYL1 179 aa24.52■■□□□ 1.52
NPAS4-204ENST00000639555 FOXO3O43524 673 aa24.52■■□□□ 1.52
NPAS4-204ENST00000639555 PSME1Q06323 249 aa24.51■■□□□ 1.51
NPAS4-204ENST00000639555 SBNO2Q9Y2G9 1366 aa24.5■■□□□ 1.51
NPAS4-204ENST00000639555 NGDNQ8NEJ9 315 aaKnown RBP24.49■■□□□ 1.51
NPAS4-204ENST00000639555 USP47Q96K76 1375 aa24.49■■□□□ 1.51
NPAS4-204ENST00000639555 FMN2Q9NZ56 1722 aa24.49■■□□□ 1.51
NPAS4-204ENST00000639555 PMFBP1Q8TBY8 1022 aa24.48■■□□□ 1.51
NPAS4-204ENST00000639555 CABP2Q9NPB3 220 aa24.48■■□□□ 1.51
NPAS4-204ENST00000639555 TULP4Q9NRJ4 1543 aa24.48■■□□□ 1.51
NPAS4-204ENST00000639555 EIF4G2P78344 907 aaKnown RBP eCLIP24.47■■□□□ 1.51
NPAS4-204ENST00000639555 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
NPAS4-204ENST00000639555 PRR36Q9H6K5 1346 aa24.45■■□□□ 1.5
NPAS4-204ENST00000639555 TMF1P82094 1093 aa24.45■■□□□ 1.5
NPAS4-204ENST00000639555 CDCA8Q53HL2 280 aa24.45■■□□□ 1.5
NPAS4-204ENST00000639555 KRT28Q7Z3Y7 464 aa24.45■■□□□ 1.5
NPAS4-204ENST00000639555 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
NPAS4-204ENST00000639555 PUS7Q96PZ0 661 aaKnown RBP24.45■■□□□ 1.5
NPAS4-204ENST00000639555 JCADQ9P266 1359 aa24.44■■□□□ 1.5
NPAS4-204ENST00000639555 AHDC1Q5TGY3 1603 aaPredicted RBP24.44■■□□□ 1.5
NPAS4-204ENST00000639555 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
NPAS4-204ENST00000639555 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
NPAS4-204ENST00000639555 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
NPAS4-204ENST00000639555 TESK2Q96S53 571 aa24.41■■□□□ 1.5
NPAS4-204ENST00000639555 ATAD2Q6PL18 1390 aa24.41■■□□□ 1.5
NPAS4-204ENST00000639555 CABP1Q9NZU7 370 aa24.39■■□□□ 1.49
NPAS4-204ENST00000639555 KIF1AQ12756 1690 aa24.39■■□□□ 1.49
NPAS4-204ENST00000639555 XPCQ01831 940 aaPredicted RBP24.38■■□□□ 1.49
NPAS4-204ENST00000639555 ATP7BP35670 1465 aa24.38■■□□□ 1.49
NPAS4-204ENST00000639555 SPATA31A6Q5VVP1 1343 aa24.37■■□□□ 1.49
NPAS4-204ENST00000639555 ZNF692Q9BU19 519 aaPredicted RBP24.37■■□□□ 1.49
NPAS4-204ENST00000639555 ACEP12821 1306 aa24.36■■□□□ 1.49
NPAS4-204ENST00000639555 PPIP5K1Q6PFW1 1433 aa24.36■■□□□ 1.49
NPAS4-204ENST00000639555 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
NPAS4-204ENST00000639555 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
NPAS4-204ENST00000639555 PAK3O75914 559 aaPredicted RBP24.34■■□□□ 1.49
NPAS4-204ENST00000639555 HSPA5P11021 654 aaKnown RBP24.34■■□□□ 1.49
NPAS4-204ENST00000639555 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
NPAS4-204ENST00000639555 LMOD2Q6P5Q4 547 aa24.34■■□□□ 1.49
NPAS4-204ENST00000639555 SBNO1A3KN83 1393 aa24.33■■□□□ 1.49
NPAS4-204ENST00000639555 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
NPAS4-204ENST00000639555 USP32Q8NFA0 1604 aa24.33■■□□□ 1.49
NPAS4-204ENST00000639555 SPATA31A3Q5VYP0 1347 aa24.33■■□□□ 1.48
NPAS4-204ENST00000639555 RGPD8O14715 1765 aaPredicted RBP24.32■■□□□ 1.48
NPAS4-204ENST00000639555 POLR3AO14802 1390 aaPredicted RBP24.31■■□□□ 1.48
NPAS4-204ENST00000639555 ITSN1Q15811 1721 aa24.31■■□□□ 1.48
NPAS4-204ENST00000639555 TERF2IPQ9NYB0 399 aa24.31■■□□□ 1.48
NPAS4-204ENST00000639555 PXDNQ92626 1479 aa24.31■■□□□ 1.48
NPAS4-204ENST00000639555 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
NPAS4-204ENST00000639555 HDGFL2Q7Z4V5 671 aaPredicted RBP24.3■■□□□ 1.48
NPAS4-204ENST00000639555 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
NPAS4-204ENST00000639555 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
NPAS4-204ENST00000639555 NUTM2BA6NNL0 878 aaPredicted RBP24.28■■□□□ 1.48
NPAS4-204ENST00000639555 NUTM2EB1AL46 878 aaPredicted RBP24.28■■□□□ 1.48
NPAS4-204ENST00000639555 NUTM2AQ8IVF1 878 aaPredicted RBP24.28■■□□□ 1.48
NPAS4-204ENST00000639555 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
NPAS4-204ENST00000639555 NINLQ9Y2I6 1382 aa24.28■■□□□ 1.48
NPAS4-204ENST00000639555 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
NPAS4-204ENST00000639555 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
NPAS4-204ENST00000639555 TNS3Q68CZ2 1445 aa24.26■■□□□ 1.47
NPAS4-204ENST00000639555 SLC12A5Q9H2X9 1139 aa24.25■■□□□ 1.47
NPAS4-204ENST00000639555 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
NPAS4-204ENST00000639555 DISP3Q9P2K9 1392 aa24.23■■□□□ 1.47
NPAS4-204ENST00000639555 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms