RNA–Protein interactions for RNA: ENST00000639481.1

CROCCP2-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene CROCCP2, Length 1,296 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-205ENST00000639481 ABCC11Q96J66 1382 aa28.49■■■□□ 2.15
CROCCP2-205ENST00000639481 YTHDC2Q9H6S0 1430 aaKnown RBP28.47■■■□□ 2.15
CROCCP2-205ENST00000639481 PNPLA6Q8IY17 1366 aa28.47■■■□□ 2.15
CROCCP2-205ENST00000639481 NUTM2BA6NNL0 878 aaPredicted RBP28.46■■■□□ 2.15
CROCCP2-205ENST00000639481 NUTM2EB1AL46 878 aaPredicted RBP28.46■■■□□ 2.15
CROCCP2-205ENST00000639481 NUTM2AQ8IVF1 878 aaPredicted RBP28.46■■■□□ 2.15
CROCCP2-205ENST00000639481 LRRC59Q96AG4 307 aaKnown RBP28.46■■■□□ 2.15
CROCCP2-205ENST00000639481 MEX3CQ5U5Q3 659 aaKnown RBP28.45■■■□□ 2.14
CROCCP2-205ENST00000639481 C14orf93Q9H972 538 aaKnown RBP28.45■■■□□ 2.14
CROCCP2-205ENST00000639481 CFAP70Q5T0N1 1121 aa28.43■■■□□ 2.14
CROCCP2-205ENST00000639481 SOS2Q07890 1332 aaPredicted RBP28.43■■■□□ 2.14
CROCCP2-205ENST00000639481 FMN2Q9NZ56 1722 aa28.42■■■□□ 2.14
CROCCP2-205ENST00000639481 HRCP23327 699 aa28.39■■■□□ 2.14
CROCCP2-205ENST00000639481 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
CROCCP2-205ENST00000639481 PXDNQ92626 1479 aa28.36■■■□□ 2.13
CROCCP2-205ENST00000639481 NUTM2FA1L443 756 aa28.36■■■□□ 2.13
CROCCP2-205ENST00000639481 ESCO1Q5FWF5 840 aa28.36■■■□□ 2.13
CROCCP2-205ENST00000639481 ZNF772Q68DY9 489 aaPredicted RBP28.36■■■□□ 2.13
CROCCP2-205ENST00000639481 ADGRB1O14514 1584 aa28.35■■■□□ 2.13
CROCCP2-205ENST00000639481 COL22A1Q8NFW1 1626 aaPredicted RBP28.34■■■□□ 2.13
CROCCP2-205ENST00000639481 SIRT1Q96EB6 747 aa28.33■■■□□ 2.13
CROCCP2-205ENST00000639481 AFF2P51816 1311 aa28.33■■■□□ 2.13
CROCCP2-205ENST00000639481 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
CROCCP2-205ENST00000639481 NPHP3Q7Z494 1330 aa28.3■■■□□ 2.12
CROCCP2-205ENST00000639481 DLC1Q96QB1 1528 aa28.29■■■□□ 2.12
CROCCP2-205ENST00000639481 FOXO3O43524 673 aa28.29■■■□□ 2.12
CROCCP2-205ENST00000639481 C8orf37Q96NL8 207 aa28.29■■■□□ 2.12
CROCCP2-205ENST00000639481 XPCQ01831 940 aaPredicted RBP28.28■■■□□ 2.12
CROCCP2-205ENST00000639481 KDM2AQ9Y2K7 1162 aa28.28■■■□□ 2.12
CROCCP2-205ENST00000639481 KIF1AQ12756 1690 aa28.28■■■□□ 2.12
CROCCP2-205ENST00000639481 DCAF11Q8TEB1 546 aa28.27■■■□□ 2.12
CROCCP2-205ENST00000639481 PRAM1Q96QH2 718 aa28.27■■■□□ 2.12
CROCCP2-205ENST00000639481 ADAMTS2O95450 1211 aa28.26■■■□□ 2.11
CROCCP2-205ENST00000639481 SAFB2Q14151 953 aaKnown RBP eCLIP28.25■■■□□ 2.11
CROCCP2-205ENST00000639481 USP32Q8NFA0 1604 aa28.25■■■□□ 2.11
CROCCP2-205ENST00000639481 ADGRB2O60241 1585 aa28.23■■■□□ 2.11
CROCCP2-205ENST00000639481 MARF1Q9Y4F3 1742 aaKnown RBP28.23■■■□□ 2.11
CROCCP2-205ENST00000639481 RXRBP28702 533 aa28.22■■■□□ 2.11
CROCCP2-205ENST00000639481 TRAK1Q9UPV9 953 aa28.2■■■□□ 2.1
CROCCP2-205ENST00000639481 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
CROCCP2-205ENST00000639481 NGLY1Q96IV0 654 aa28.18■■■□□ 2.1
CROCCP2-205ENST00000639481 ARHGEF28Q8N1W1 1705 aaKnown RBP28.18■■■□□ 2.1
CROCCP2-205ENST00000639481 QTRT2Q9H974 415 aaKnown RBP28.17■■■□□ 2.1
CROCCP2-205ENST00000639481 POGKQ9P215 609 aa28.16■■■□□ 2.1
CROCCP2-205ENST00000639481 SPATA31A3Q5VYP0 1347 aa28.15■■■□□ 2.1
CROCCP2-205ENST00000639481 STAC3Q96MF2 364 aa28.14■■■□□ 2.1
CROCCP2-205ENST00000639481 PHF8Q9UPP1 1060 aa28.14■■■□□ 2.1
CROCCP2-205ENST00000639481 RGS12O14924 1447 aa28.14■■■□□ 2.1
CROCCP2-205ENST00000639481 HIRIP3Q9BW71 556 aaPredicted RBP28.13■■■□□ 2.09
CROCCP2-205ENST00000639481 KRT28Q7Z3Y7 464 aa28.12■■■□□ 2.09
CROCCP2-205ENST00000639481 FNBP4Q8N3X1 1017 aaPredicted RBP28.12■■■□□ 2.09
CROCCP2-205ENST00000639481 ANKARQ7Z5J8 1434 aa28.1■■■□□ 2.09
CROCCP2-205ENST00000639481 RBM6P78332 1123 aaKnown RBP28.1■■■□□ 2.09
CROCCP2-205ENST00000639481 USP21Q9UK80 565 aa28.1■■■□□ 2.09
CROCCP2-205ENST00000639481 MINK1Q8N4C8 1332 aaPredicted RBP28.1■■■□□ 2.09
CROCCP2-205ENST00000639481 KIAA1210Q9ULL0 1709 aa28.09■■■□□ 2.09
CROCCP2-205ENST00000639481 ABCA3Q99758 1704 aa28.09■■■□□ 2.09
CROCCP2-205ENST00000639481 UPF1Q92900 1129 aaKnown RBP eCLIP28.08■■■□□ 2.09
CROCCP2-205ENST00000639481 PRR36Q9H6K5 1346 aa28.08■■■□□ 2.09
CROCCP2-205ENST00000639481 TNS3Q68CZ2 1445 aa28.08■■■□□ 2.09
CROCCP2-205ENST00000639481 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
CROCCP2-205ENST00000639481 TRPM3Q9HCF6 1732 aaPredicted RBP28.07■■■□□ 2.08
CROCCP2-205ENST00000639481 ATRNO75882 1429 aa28.07■■■□□ 2.08
CROCCP2-205ENST00000639481 TULP4Q9NRJ4 1543 aa28.07■■■□□ 2.08
CROCCP2-205ENST00000639481 PMFBP1Q8TBY8 1022 aa28.06■■■□□ 2.08
CROCCP2-205ENST00000639481 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.04■■■□□ 2.08
CROCCP2-205ENST00000639481 SBNO1A3KN83 1393 aa28.03■■■□□ 2.08
CROCCP2-205ENST00000639481 WASLO00401 505 aaPredicted RBP28.02■■■□□ 2.08
CROCCP2-205ENST00000639481 TRPC5Q9UL62 973 aaPredicted RBP28.02■■■□□ 2.08
CROCCP2-205ENST00000639481 ALS2Q96Q42 1657 aa28.01■■■□□ 2.07
CROCCP2-205ENST00000639481 PSME1Q06323 249 aa28■■■□□ 2.07
CROCCP2-205ENST00000639481 CABLES1Q8TDN4 633 aa28■■■□□ 2.07
CROCCP2-205ENST00000639481 SLIT2O94813 1529 aa28■■■□□ 2.07
CROCCP2-205ENST00000639481 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
CROCCP2-205ENST00000639481 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
CROCCP2-205ENST00000639481 ATP7BP35670 1465 aa27.98■■■□□ 2.07
CROCCP2-205ENST00000639481 EIF3AQ14152 1382 aaKnown RBP27.97■■■□□ 2.07
CROCCP2-205ENST00000639481 PLCH1Q4KWH8 1693 aa27.97■■■□□ 2.07
CROCCP2-205ENST00000639481 PLEKHG5O94827 1062 aa27.95■■■□□ 2.06
CROCCP2-205ENST00000639481 LMOD2Q6P5Q4 547 aa27.94■■■□□ 2.06
CROCCP2-205ENST00000639481 CRYBG1Q9Y4K1 1723 aa27.94■■■□□ 2.06
CROCCP2-205ENST00000639481 ARHGEF10O15013 1369 aa27.94■■■□□ 2.06
CROCCP2-205ENST00000639481 GLI3P10071 1580 aa27.94■■■□□ 2.06
CROCCP2-205ENST00000639481 TOPAZ1Q8N9V7 1692 aa27.94■■■□□ 2.06
CROCCP2-205ENST00000639481 SIN3AQ96ST3 1273 aa27.92■■■□□ 2.06
CROCCP2-205ENST00000639481 EP400Q96L91 3159 aa27.92■■■□□ 2.06
CROCCP2-205ENST00000639481 NWD2Q9ULI1 1742 aa27.92■■■□□ 2.06
CROCCP2-205ENST00000639481 UNC5CLQ8IV45 518 aa27.9■■■□□ 2.06
CROCCP2-205ENST00000639481 L3MBTL2Q969R5 705 aa27.9■■■□□ 2.06
CROCCP2-205ENST00000639481 NUDT16Q96DE0 195 aaKnown RBP27.89■■■□□ 2.06
CROCCP2-205ENST00000639481 GJD4Q96KN9 370 aaPredicted RBP27.89■■■□□ 2.06
CROCCP2-205ENST00000639481 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.05
CROCCP2-205ENST00000639481 GPRASP1Q5JY77 1395 aa27.88■■■□□ 2.05
CROCCP2-205ENST00000639481 HAP1P54257 671 aaPredicted RBP27.88■■■□□ 2.05
CROCCP2-205ENST00000639481 CDK19Q9BWU1 502 aa27.88■■■□□ 2.05
CROCCP2-205ENST00000639481 TRPM1Q7Z4N2 1603 aa27.87■■■□□ 2.05
CROCCP2-205ENST00000639481 NGDNQ8NEJ9 315 aaKnown RBP27.86■■■□□ 2.05
CROCCP2-205ENST00000639481 NRAPQ86VF7 1730 aa27.86■■■□□ 2.05
CROCCP2-205ENST00000639481 QRICH2Q9H0J4 1663 aa27.85■■■□□ 2.05
CROCCP2-205ENST00000639481 BRWD3Q6RI45 1802 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms