RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 REC8O95072 547 aa17.76■□□□□ 0.43
SCARB2-216ENST00000639300 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
SCARB2-216ENST00000639300 NOB1Q9ULX3 412 aaKnown RBP17.76■□□□□ 0.43
SCARB2-216ENST00000639300 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
SCARB2-216ENST00000639300 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
SCARB2-216ENST00000639300 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
SCARB2-216ENST00000639300 GOLGA6L6A8MZA4 724 aa17.75■□□□□ 0.43
SCARB2-216ENST00000639300 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
SCARB2-216ENST00000639300 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
SCARB2-216ENST00000639300 FRAT2O75474 233 aaPredicted RBP17.74■□□□□ 0.43
SCARB2-216ENST00000639300 AAMPQ13685 434 aa17.74■□□□□ 0.43
SCARB2-216ENST00000639300 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
SCARB2-216ENST00000639300 SLC52A1Q9NWF4 448 aa17.74■□□□□ 0.43
SCARB2-216ENST00000639300 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
SCARB2-216ENST00000639300 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
SCARB2-216ENST00000639300 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-216ENST00000639300 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
SCARB2-216ENST00000639300 CUL7Q14999 1698 aa17.73■□□□□ 0.43
SCARB2-216ENST00000639300 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
SCARB2-216ENST00000639300 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
SCARB2-216ENST00000639300 MSH5O43196 834 aa17.72■□□□□ 0.43
SCARB2-216ENST00000639300 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
SCARB2-216ENST00000639300 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.43
SCARB2-216ENST00000639300 WDR63Q8IWG1 891 aa17.71■□□□□ 0.42
SCARB2-216ENST00000639300 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
SCARB2-216ENST00000639300 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
SCARB2-216ENST00000639300 SLC26A8Q96RN1 970 aa17.69■□□□□ 0.42
SCARB2-216ENST00000639300 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
SCARB2-216ENST00000639300 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
SCARB2-216ENST00000639300 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
SCARB2-216ENST00000639300 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
SCARB2-216ENST00000639300 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
SCARB2-216ENST00000639300 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
SCARB2-216ENST00000639300 IFIT2P09913 472 aaKnown RBP17.67■□□□□ 0.42
SCARB2-216ENST00000639300 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
SCARB2-216ENST00000639300 SKOR2Q2VWA4 1001 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-216ENST00000639300 ISY1Q9ULR0 285 aaKnown RBP17.67■□□□□ 0.42
SCARB2-216ENST00000639300 MVPQ14764 893 aaKnown RBP17.67■□□□□ 0.42
SCARB2-216ENST00000639300 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
SCARB2-216ENST00000639300 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
SCARB2-216ENST00000639300 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
SCARB2-216ENST00000639300 CDC45O75419 566 aa17.65■□□□□ 0.42
SCARB2-216ENST00000639300 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
SCARB2-216ENST00000639300 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
SCARB2-216ENST00000639300 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
SCARB2-216ENST00000639300 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-216ENST00000639300 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
SCARB2-216ENST00000639300 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-216ENST00000639300 NLRP2Q9NX02 1062 aa17.63■□□□□ 0.41
SCARB2-216ENST00000639300 RUFY2Q8WXA3 655 aa17.63■□□□□ 0.41
SCARB2-216ENST00000639300 SURF6O75683 361 aaKnown RBP17.63■□□□□ 0.41
SCARB2-216ENST00000639300 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARB2-216ENST00000639300 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
SCARB2-216ENST00000639300 MCTP1Q6DN14 999 aa17.62■□□□□ 0.41
SCARB2-216ENST00000639300 DISP3Q9P2K9 1392 aa17.62■□□□□ 0.41
SCARB2-216ENST00000639300 RPGRIP1LQ68CZ1 1315 aa17.62■□□□□ 0.41
SCARB2-216ENST00000639300 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
SCARB2-216ENST00000639300 ZNF428Q96B54 188 aa17.62■□□□□ 0.41
SCARB2-216ENST00000639300 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
SCARB2-216ENST00000639300 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
SCARB2-216ENST00000639300 H3BQV1 296 aa17.61■□□□□ 0.41
SCARB2-216ENST00000639300 PHF14O94880 888 aa17.61■□□□□ 0.41
SCARB2-216ENST00000639300 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
SCARB2-216ENST00000639300 IDI1Q13907 227 aa17.61■□□□□ 0.41
SCARB2-216ENST00000639300 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
SCARB2-216ENST00000639300 FAM184AQ8NB25 1140 aa17.61■□□□□ 0.41
SCARB2-216ENST00000639300 RARSP54136 660 aaKnown RBP17.6■□□□□ 0.41
SCARB2-216ENST00000639300 TMEM57Q8N5G2 664 aa17.6■□□□□ 0.41
SCARB2-216ENST00000639300 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
SCARB2-216ENST00000639300 GTF2E1P29083 439 aaPredicted RBP17.6■□□□□ 0.41
SCARB2-216ENST00000639300 EVA1CP58658 441 aa17.6■□□□□ 0.41
SCARB2-216ENST00000639300 SSH1Q8WYL5 1049 aa17.6■□□□□ 0.41
SCARB2-216ENST00000639300 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
SCARB2-216ENST00000639300 NUCB2P80303 420 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 VPS37CA5D8V6 355 aaPredicted RBP17.59■□□□□ 0.41
SCARB2-216ENST00000639300 TRAK2O60296 914 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 FCHSD2O94868 740 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 GAS2L2Q8NHY3 880 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 GNAI3P08754 354 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 NEK4P51957 841 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
SCARB2-216ENST00000639300 GCC1Q96CN9 775 aa17.58■□□□□ 0.41
SCARB2-216ENST00000639300 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
SCARB2-216ENST00000639300 RIC3Q7Z5B4 369 aa17.58■□□□□ 0.4
SCARB2-216ENST00000639300 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
SCARB2-216ENST00000639300 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
SCARB2-216ENST00000639300 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
SCARB2-216ENST00000639300 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
SCARB2-216ENST00000639300 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
SCARB2-216ENST00000639300 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
SCARB2-216ENST00000639300 ATAD2Q6PL18 1390 aa17.57■□□□□ 0.4
SCARB2-216ENST00000639300 HDGFL1Q5TGJ6 251 aa17.56■□□□□ 0.4
SCARB2-216ENST00000639300 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
SCARB2-216ENST00000639300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-216ENST00000639300 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
SCARB2-216ENST00000639300 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
SCARB2-216ENST00000639300 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
SCARB2-216ENST00000639300 HSP90AB4PQ58FF6 505 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms