RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
PAX6-244ENST00000638913 STK26Q9P289 416 aa13.29□□□□□ -0.28
PAX6-244ENST00000638913 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
PAX6-244ENST00000638913 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
PAX6-244ENST00000638913 MYOM2P54296 1465 aa13.28□□□□□ -0.28
PAX6-244ENST00000638913 RAPGEF3O95398 923 aa13.28□□□□□ -0.28
PAX6-244ENST00000638913 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
PAX6-244ENST00000638913 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
PAX6-244ENST00000638913 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.29
PAX6-244ENST00000638913 EFCAB6Q5THR3 1501 aa13.27□□□□□ -0.29
PAX6-244ENST00000638913 RLBP1P12271 317 aa13.27□□□□□ -0.29
PAX6-244ENST00000638913 NPATQ14207 1427 aa13.26□□□□□ -0.29
PAX6-244ENST00000638913 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
PAX6-244ENST00000638913 SEC24BO95487 1268 aa13.26□□□□□ -0.29
PAX6-244ENST00000638913 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
PAX6-244ENST00000638913 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
PAX6-244ENST00000638913 NFKBIBQ15653 356 aa13.26□□□□□ -0.29
PAX6-244ENST00000638913 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
PAX6-244ENST00000638913 IL27Q8NEV9 243 aa13.25□□□□□ -0.29
PAX6-244ENST00000638913 KIF1BO60333 1816 aa13.25□□□□□ -0.29
PAX6-244ENST00000638913 RARSP54136 660 aaKnown RBP13.25□□□□□ -0.29
PAX6-244ENST00000638913 CFAP74Q9C0B2 1584 aa13.24□□□□□ -0.29
PAX6-244ENST00000638913 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
PAX6-244ENST00000638913 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
PAX6-244ENST00000638913 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
PAX6-244ENST00000638913 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
PAX6-244ENST00000638913 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
PAX6-244ENST00000638913 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
PAX6-244ENST00000638913 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
PAX6-244ENST00000638913 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
PAX6-244ENST00000638913 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
PAX6-244ENST00000638913 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
PAX6-244ENST00000638913 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
PAX6-244ENST00000638913 NRXN1Q9ULB1 1477 aa13.22□□□□□ -0.29
PAX6-244ENST00000638913 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
PAX6-244ENST00000638913 NEO1Q92859 1461 aa13.21□□□□□ -0.29
PAX6-244ENST00000638913 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.3
PAX6-244ENST00000638913 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
PAX6-244ENST00000638913 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
PAX6-244ENST00000638913 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
PAX6-244ENST00000638913 FRAT2O75474 233 aaPredicted RBP13.2□□□□□ -0.3
PAX6-244ENST00000638913 IDI1Q13907 227 aa13.2□□□□□ -0.3
PAX6-244ENST00000638913 NGEFQ8N5V2 710 aa13.19□□□□□ -0.3
PAX6-244ENST00000638913 YEATS2Q9ULM3 1422 aa13.19□□□□□ -0.3
PAX6-244ENST00000638913 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
PAX6-244ENST00000638913 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
PAX6-244ENST00000638913 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
PAX6-244ENST00000638913 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
PAX6-244ENST00000638913 USP19O94966 1318 aa13.18□□□□□ -0.3
PAX6-244ENST00000638913 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
PAX6-244ENST00000638913 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
PAX6-244ENST00000638913 ADGRB1O14514 1584 aa13.18□□□□□ -0.3
PAX6-244ENST00000638913 QRICH2Q9H0J4 1663 aa13.17□□□□□ -0.3
PAX6-244ENST00000638913 FBLN1P23142 703 aa13.17□□□□□ -0.3
PAX6-244ENST00000638913 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
PAX6-244ENST00000638913 GLI2P10070 1586 aa13.17□□□□□ -0.3
PAX6-244ENST00000638913 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
PAX6-244ENST00000638913 LMTK2Q8IWU2 1503 aa13.16□□□□□ -0.3
PAX6-244ENST00000638913 GSE1Q14687 1217 aa13.16□□□□□ -0.3
PAX6-244ENST00000638913 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
PAX6-244ENST00000638913 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
PAX6-244ENST00000638913 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
PAX6-244ENST00000638913 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
PAX6-244ENST00000638913 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
PAX6-244ENST00000638913 RPGRIP1LQ68CZ1 1315 aa13.16□□□□□ -0.3
PAX6-244ENST00000638913 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
PAX6-244ENST00000638913 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
PAX6-244ENST00000638913 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
PAX6-244ENST00000638913 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
PAX6-244ENST00000638913 PMFBP1Q8TBY8 1022 aa13.15□□□□□ -0.3
PAX6-244ENST00000638913 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
PAX6-244ENST00000638913 TSPOAP1O95153 1857 aa13.15□□□□□ -0.31
PAX6-244ENST00000638913 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 POGKQ9P215 609 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 ABCC3O15438 1527 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
PAX6-244ENST00000638913 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
PAX6-244ENST00000638913 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
PAX6-244ENST00000638913 PPLO60437 1756 aa13.13□□□□□ -0.31
PAX6-244ENST00000638913 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
PAX6-244ENST00000638913 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
PAX6-244ENST00000638913 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
PAX6-244ENST00000638913 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
PAX6-244ENST00000638913 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
PAX6-244ENST00000638913 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 FYB1O15117 783 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
PAX6-244ENST00000638913 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
PAX6-244ENST00000638913 RIPK4P57078 832 aa13.11□□□□□ -0.31
PAX6-244ENST00000638913 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
PAX6-244ENST00000638913 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms