RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 STK26Q9P289 416 aa25.07■■□□□ 1.6
SMN2-216ENST00000638794 LRPPRCP42704 1394 aaKnown RBP25.06■■□□□ 1.6
SMN2-216ENST00000638794 RXRBP28702 533 aa25.05■■□□□ 1.6
SMN2-216ENST00000638794 TMEM132EQ6IEE7 984 aa25.05■■□□□ 1.6
SMN2-216ENST00000638794 C8orf37Q96NL8 207 aa25.05■■□□□ 1.6
SMN2-216ENST00000638794 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
SMN2-216ENST00000638794 WAPLQ7Z5K2 1190 aa25.04■■□□□ 1.6
SMN2-216ENST00000638794 ABCC11Q96J66 1382 aa25.03■■□□□ 1.6
SMN2-216ENST00000638794 PLEKHH1Q9ULM0 1364 aa25.02■■□□□ 1.6
SMN2-216ENST00000638794 CDK12Q9NYV4 1490 aaPredicted RBP25.02■■□□□ 1.6
SMN2-216ENST00000638794 ESCO1Q5FWF5 840 aa25.01■■□□□ 1.59
SMN2-216ENST00000638794 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
SMN2-216ENST00000638794 YTHDC2Q9H6S0 1430 aaKnown RBP25.01■■□□□ 1.59
SMN2-216ENST00000638794 COL22A1Q8NFW1 1626 aaPredicted RBP25.01■■□□□ 1.59
SMN2-216ENST00000638794 ADAMTS2O95450 1211 aa25■■□□□ 1.59
SMN2-216ENST00000638794 PXDNQ92626 1479 aa24.99■■□□□ 1.59
SMN2-216ENST00000638794 NRXN1Q9ULB1 1477 aa24.99■■□□□ 1.59
SMN2-216ENST00000638794 MYOM2P54296 1465 aa24.98■■□□□ 1.59
SMN2-216ENST00000638794 NPHP3Q7Z494 1330 aa24.98■■□□□ 1.59
SMN2-216ENST00000638794 FMN2Q9NZ56 1722 aa24.98■■□□□ 1.59
SMN2-216ENST00000638794 NUTM2FA1L443 756 aa24.96■■□□□ 1.59
SMN2-216ENST00000638794 C14orf93Q9H972 538 aaKnown RBP24.96■■□□□ 1.59
SMN2-216ENST00000638794 QTRT2Q9H974 415 aaKnown RBP24.96■■□□□ 1.59
SMN2-216ENST00000638794 NGLY1Q96IV0 654 aa24.95■■□□□ 1.58
SMN2-216ENST00000638794 FOXO3O43524 673 aa24.94■■□□□ 1.58
SMN2-216ENST00000638794 UPF1Q92900 1129 aaKnown RBP eCLIP24.94■■□□□ 1.58
SMN2-216ENST00000638794 XPCQ01831 940 aaPredicted RBP24.93■■□□□ 1.58
SMN2-216ENST00000638794 RGS12O14924 1447 aa24.93■■□□□ 1.58
SMN2-216ENST00000638794 RBM6P78332 1123 aaKnown RBP24.92■■□□□ 1.58
SMN2-216ENST00000638794 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
SMN2-216ENST00000638794 KIF1AQ12756 1690 aa24.91■■□□□ 1.58
SMN2-216ENST00000638794 SIRT1Q96EB6 747 aa24.9■■□□□ 1.58
SMN2-216ENST00000638794 DHX57Q6P158 1386 aaKnown RBP24.9■■□□□ 1.58
SMN2-216ENST00000638794 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
SMN2-216ENST00000638794 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.58
SMN2-216ENST00000638794 USP21Q9UK80 565 aa24.88■■□□□ 1.57
SMN2-216ENST00000638794 FNBP4Q8N3X1 1017 aaPredicted RBP24.87■■□□□ 1.57
SMN2-216ENST00000638794 PRAM1Q96QH2 718 aa24.84■■□□□ 1.57
SMN2-216ENST00000638794 DLC1Q96QB1 1528 aa24.83■■□□□ 1.57
SMN2-216ENST00000638794 SAFB2Q14151 953 aaKnown RBP eCLIP24.83■■□□□ 1.57
SMN2-216ENST00000638794 TRPC5Q9UL62 973 aaPredicted RBP24.83■■□□□ 1.57
SMN2-216ENST00000638794 ADGRB1O14514 1584 aa24.83■■□□□ 1.57
SMN2-216ENST00000638794 ATRNO75882 1429 aa24.82■■□□□ 1.56
SMN2-216ENST00000638794 SPATA31A3Q5VYP0 1347 aa24.81■■□□□ 1.56
SMN2-216ENST00000638794 BCL9LQ86UU0 1499 aa24.8■■□□□ 1.56
SMN2-216ENST00000638794 KRT28Q7Z3Y7 464 aa24.79■■□□□ 1.56
SMN2-216ENST00000638794 PHF8Q9UPP1 1060 aa24.79■■□□□ 1.56
SMN2-216ENST00000638794 ADGRB2O60241 1585 aa24.78■■□□□ 1.56
SMN2-216ENST00000638794 USP32Q8NFA0 1604 aa24.78■■□□□ 1.56
SMN2-216ENST00000638794 POGKQ9P215 609 aa24.77■■□□□ 1.56
SMN2-216ENST00000638794 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
SMN2-216ENST00000638794 KDM2AQ9Y2K7 1162 aa24.76■■□□□ 1.55
SMN2-216ENST00000638794 TNS3Q68CZ2 1445 aa24.76■■□□□ 1.55
SMN2-216ENST00000638794 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.75■■□□□ 1.55
SMN2-216ENST00000638794 HRCP23327 699 aa24.75■■□□□ 1.55
SMN2-216ENST00000638794 EP400Q96L91 3159 aa24.74■■□□□ 1.55
SMN2-216ENST00000638794 TRAK1Q9UPV9 953 aa24.74■■□□□ 1.55
SMN2-216ENST00000638794 ANKARQ7Z5J8 1434 aa24.73■■□□□ 1.55
SMN2-216ENST00000638794 ATAD2Q6PL18 1390 aa24.72■■□□□ 1.55
SMN2-216ENST00000638794 PSME1Q06323 249 aa24.72■■□□□ 1.55
SMN2-216ENST00000638794 SLIT2O94813 1529 aa24.71■■□□□ 1.55
SMN2-216ENST00000638794 HIRIP3Q9BW71 556 aaPredicted RBP24.71■■□□□ 1.55
SMN2-216ENST00000638794 ABCA3Q99758 1704 aa24.71■■□□□ 1.55
SMN2-216ENST00000638794 SBNO1A3KN83 1393 aa24.7■■□□□ 1.55
SMN2-216ENST00000638794 PMFBP1Q8TBY8 1022 aa24.69■■□□□ 1.54
SMN2-216ENST00000638794 MINK1Q8N4C8 1332 aaPredicted RBP24.68■■□□□ 1.54
SMN2-216ENST00000638794 GJD4Q96KN9 370 aaPredicted RBP24.68■■□□□ 1.54
SMN2-216ENST00000638794 STAC3Q96MF2 364 aa24.68■■□□□ 1.54
SMN2-216ENST00000638794 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
SMN2-216ENST00000638794 UNC5CLQ8IV45 518 aa24.67■■□□□ 1.54
SMN2-216ENST00000638794 CABLES1Q8TDN4 633 aa24.67■■□□□ 1.54
SMN2-216ENST00000638794 TRPM3Q9HCF6 1732 aaPredicted RBP24.66■■□□□ 1.54
SMN2-216ENST00000638794 TULP4Q9NRJ4 1543 aa24.66■■□□□ 1.54
SMN2-216ENST00000638794 HAP1P54257 671 aaPredicted RBP24.66■■□□□ 1.54
SMN2-216ENST00000638794 GLI3P10071 1580 aa24.66■■□□□ 1.54
SMN2-216ENST00000638794 ARHGEF10O15013 1369 aa24.66■■□□□ 1.54
SMN2-216ENST00000638794 PLCH1Q4KWH8 1693 aa24.66■■□□□ 1.54
SMN2-216ENST00000638794 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
SMN2-216ENST00000638794 LMOD2Q6P5Q4 547 aa24.65■■□□□ 1.54
SMN2-216ENST00000638794 EIF3AQ14152 1382 aaKnown RBP24.65■■□□□ 1.54
SMN2-216ENST00000638794 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.54
SMN2-216ENST00000638794 PRR36Q9H6K5 1346 aa24.64■■□□□ 1.54
SMN2-216ENST00000638794 NWD2Q9ULI1 1742 aa24.64■■□□□ 1.53
SMN2-216ENST00000638794 ALS2Q96Q42 1657 aa24.62■■□□□ 1.53
SMN2-216ENST00000638794 WASLO00401 505 aaPredicted RBP24.62■■□□□ 1.53
SMN2-216ENST00000638794 BRWD3Q6RI45 1802 aa24.58■■□□□ 1.53
SMN2-216ENST00000638794 ITSN1Q15811 1721 aa24.58■■□□□ 1.53
SMN2-216ENST00000638794 GPRASP1Q5JY77 1395 aa24.58■■□□□ 1.53
SMN2-216ENST00000638794 KIAA1210Q9ULL0 1709 aa24.58■■□□□ 1.52
SMN2-216ENST00000638794 ATP7BP35670 1465 aa24.56■■□□□ 1.52
SMN2-216ENST00000638794 VPS72Q15906 364 aa24.55■■□□□ 1.52
SMN2-216ENST00000638794 NRAPQ86VF7 1730 aa24.55■■□□□ 1.52
SMN2-216ENST00000638794 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
SMN2-216ENST00000638794 NGDNQ8NEJ9 315 aaKnown RBP24.54■■□□□ 1.52
SMN2-216ENST00000638794 SRCAPQ6ZRS2 3230 aa24.54■■□□□ 1.52
SMN2-216ENST00000638794 FAM83GA6ND36 823 aa24.53■■□□□ 1.52
SMN2-216ENST00000638794 NUDT16Q96DE0 195 aaKnown RBP24.51■■□□□ 1.51
SMN2-216ENST00000638794 CCDC9Q9Y3X0 531 aaKnown RBP24.51■■□□□ 1.51
SMN2-216ENST00000638794 COL14A1Q05707 1796 aaKnown RBP24.51■■□□□ 1.51
SMN2-216ENST00000638794 CCDC125Q86Z20 511 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms