RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 WDR63Q8IWG1 891 aa10.4□□□□□ -0.75
SCARB2-211ENST00000638603 EVC2Q86UK5 1308 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
SCARB2-211ENST00000638603 GGNBP2Q9H3C7 697 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-211ENST00000638603 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 PTPRTO14522 1441 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 TRPM2O94759 1503 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 ABCC1P33527 1531 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 ADGRL1O94910 1474 aa10.39□□□□□ -0.75
SCARB2-211ENST00000638603 GZF1Q9H116 711 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-211ENST00000638603 POGKQ9P215 609 aa10.38□□□□□ -0.75
SCARB2-211ENST00000638603 NINLQ9Y2I6 1382 aa10.38□□□□□ -0.75
SCARB2-211ENST00000638603 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
SCARB2-211ENST00000638603 CHD1O14646 1710 aa10.37□□□□□ -0.75
SCARB2-211ENST00000638603 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
SCARB2-211ENST00000638603 CLTCL1P53675 1640 aa10.37□□□□□ -0.75
SCARB2-211ENST00000638603 C14orf93Q9H972 538 aaKnown RBP10.37□□□□□ -0.75
SCARB2-211ENST00000638603 MVPQ14764 893 aaKnown RBP10.37□□□□□ -0.75
SCARB2-211ENST00000638603 VGFO15240 615 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-211ENST00000638603 KDM5AP29375 1690 aaKnown RBP10.36□□□□□ -0.75
SCARB2-211ENST00000638603 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-211ENST00000638603 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
SCARB2-211ENST00000638603 AAMPQ13685 434 aa10.36□□□□□ -0.75
SCARB2-211ENST00000638603 RNF17Q9BXT8 1623 aaKnown RBP10.35□□□□□ -0.75
SCARB2-211ENST00000638603 RIPK4P57078 832 aa10.35□□□□□ -0.75
SCARB2-211ENST00000638603 ATP7AQ04656 1500 aa10.35□□□□□ -0.75
SCARB2-211ENST00000638603 USP19O94966 1318 aa10.34□□□□□ -0.75
SCARB2-211ENST00000638603 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
SCARB2-211ENST00000638603 C22orf23Q9BZE7 217 aa10.34□□□□□ -0.75
SCARB2-211ENST00000638603 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
SCARB2-211ENST00000638603 ZCCHC11Q5TAX3 1644 aaKnown RBP10.34□□□□□ -0.75
SCARB2-211ENST00000638603 ZFYVE16Q7Z3T8 1539 aa10.34□□□□□ -0.75
SCARB2-211ENST00000638603 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
SCARB2-211ENST00000638603 HSCBQ8IWL3 235 aa10.33□□□□□ -0.76
SCARB2-211ENST00000638603 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
SCARB2-211ENST00000638603 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
SCARB2-211ENST00000638603 TBC1D32Q96NH3 1257 aa10.33□□□□□ -0.76
SCARB2-211ENST00000638603 TERF2IPQ9NYB0 399 aa10.33□□□□□ -0.76
SCARB2-211ENST00000638603 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
SCARB2-211ENST00000638603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCARB2-211ENST00000638603 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
SCARB2-211ENST00000638603 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
SCARB2-211ENST00000638603 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
SCARB2-211ENST00000638603 CLASP1Q7Z460 1538 aa10.32□□□□□ -0.76
SCARB2-211ENST00000638603 TRIM27P14373 513 aa10.32□□□□□ -0.76
SCARB2-211ENST00000638603 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-211ENST00000638603 L1TD1Q5T7N2 865 aaKnown RBP10.32□□□□□ -0.76
SCARB2-211ENST00000638603 LNPKQ9C0E8 428 aa10.32□□□□□ -0.76
SCARB2-211ENST00000638603 ATF7IPQ6VMQ6 1270 aa10.31□□□□□ -0.76
SCARB2-211ENST00000638603 HDGFL2Q7Z4V5 671 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-211ENST00000638603 DIAPH1O60610 1272 aaKnown RBP10.31□□□□□ -0.76
SCARB2-211ENST00000638603 RAPGEF3O95398 923 aa10.31□□□□□ -0.76
SCARB2-211ENST00000638603 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
SCARB2-211ENST00000638603 TMEM57Q8N5G2 664 aa10.3□□□□□ -0.76
SCARB2-211ENST00000638603 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
SCARB2-211ENST00000638603 TET3O43151 1660 aa10.3□□□□□ -0.76
SCARB2-211ENST00000638603 SBNO2Q9Y2G9 1366 aa10.3□□□□□ -0.76
SCARB2-211ENST00000638603 HSP90AB1P08238 724 aaKnown RBP10.3□□□□□ -0.76
SCARB2-211ENST00000638603 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
SCARB2-211ENST00000638603 GOLGA6L3A6NEY3 463 aa10.3□□□□□ -0.76
SCARB2-211ENST00000638603 PRAM1Q96QH2 718 aa10.3□□□□□ -0.76
SCARB2-211ENST00000638603 MYOM2P54296 1465 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 MAP3K4Q9Y6R4 1608 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 UHRF1BP1LA0JNW5 1464 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 CEP152O94986 1710 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 ANKRD45Q5TZF3 282 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
SCARB2-211ENST00000638603 HMOX1P09601 288 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 ABCA6Q8N139 1617 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 CT47B1P0C2W7 299 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-211ENST00000638603 FBLN1P23142 703 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 IDI1Q13907 227 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 ANKRD36BQ8N2N9 1353 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 ASXL2Q76L83 1435 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 C1orf115Q9H7X2 142 aa10.28□□□□□ -0.76
SCARB2-211ENST00000638603 SHROOM2Q13796 1616 aa10.27□□□□□ -0.76
SCARB2-211ENST00000638603 PHF23Q9BUL5 403 aaPredicted RBP10.27□□□□□ -0.77
SCARB2-211ENST00000638603 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
SCARB2-211ENST00000638603 PRKAR2BP31323 418 aa10.27□□□□□ -0.77
SCARB2-211ENST00000638603 MCM4P33991 863 aa10.27□□□□□ -0.77
SCARB2-211ENST00000638603 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
SCARB2-211ENST00000638603 MYOM1P52179 1685 aa10.27□□□□□ -0.77
SCARB2-211ENST00000638603 NPATQ14207 1427 aa10.27□□□□□ -0.77
SCARB2-211ENST00000638603 FYB1O15117 783 aa10.26□□□□□ -0.77
SCARB2-211ENST00000638603 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
SCARB2-211ENST00000638603 TRIM35Q9UPQ4 493 aa10.26□□□□□ -0.77
SCARB2-211ENST00000638603 ZNF518AQ6AHZ1 1483 aa10.26□□□□□ -0.77
SCARB2-211ENST00000638603 TRAK2O60296 914 aa10.25□□□□□ -0.77
SCARB2-211ENST00000638603 A0A1W2PP64 1363 aa10.25□□□□□ -0.77
SCARB2-211ENST00000638603 KIF1BO60333 1816 aa10.25□□□□□ -0.77
SCARB2-211ENST00000638603 FAM43AQ8N2R8 423 aa10.25□□□□□ -0.77
SCARB2-211ENST00000638603 CDK19Q9BWU1 502 aa10.25□□□□□ -0.77
SCARB2-211ENST00000638603 NSD2O96028 1365 aa10.25□□□□□ -0.77
SCARB2-211ENST00000638603 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-211ENST00000638603 ANTXR1Q9H6X2 564 aa10.24□□□□□ -0.77
SCARB2-211ENST00000638603 CD109Q6YHK3 1445 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms