RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 MCTP1Q6DN14 999 aa20.43■□□□□ 0.86
SCARB2-210ENST00000638567 HSP90B1P14625 803 aaKnown RBP20.43■□□□□ 0.86
SCARB2-210ENST00000638567 NUCB2P80303 420 aa20.43■□□□□ 0.86
SCARB2-210ENST00000638567 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
SCARB2-210ENST00000638567 EIF2S2P20042 333 aaKnown RBP20.43■□□□□ 0.86
SCARB2-210ENST00000638567 GNL2Q13823 731 aaKnown RBP20.42■□□□□ 0.86
SCARB2-210ENST00000638567 ATF7IPQ6VMQ6 1270 aa20.42■□□□□ 0.86
SCARB2-210ENST00000638567 PLEKHH2Q8IVE3 1493 aa20.42■□□□□ 0.86
SCARB2-210ENST00000638567 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
SCARB2-210ENST00000638567 PRAM1Q96QH2 718 aa20.41■□□□□ 0.86
SCARB2-210ENST00000638567 MAGI1Q96QZ7 1491 aaPredicted RBP20.4■□□□□ 0.86
SCARB2-210ENST00000638567 CDK11BP21127 795 aaKnown RBP20.4■□□□□ 0.86
SCARB2-210ENST00000638567 DUSP27Q5VZP5 1158 aa20.4■□□□□ 0.86
SCARB2-210ENST00000638567 NINLQ9Y2I6 1382 aa20.4■□□□□ 0.86
SCARB2-210ENST00000638567 TSPYL4Q9UJ04 414 aa20.39■□□□□ 0.86
SCARB2-210ENST00000638567 CCDC141Q6ZP82 1450 aa20.39■□□□□ 0.85
SCARB2-210ENST00000638567 DIAPH3Q9NSV4 1193 aa20.39■□□□□ 0.85
SCARB2-210ENST00000638567 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCARB2-210ENST00000638567 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
SCARB2-210ENST00000638567 TEFQ10587 303 aa20.38■□□□□ 0.85
SCARB2-210ENST00000638567 ATP6V1DQ9Y5K8 247 aa20.38■□□□□ 0.85
SCARB2-210ENST00000638567 GORABQ5T7V8 394 aa20.38■□□□□ 0.85
SCARB2-210ENST00000638567 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
SCARB2-210ENST00000638567 FAM43AQ8N2R8 423 aa20.37■□□□□ 0.85
SCARB2-210ENST00000638567 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
SCARB2-210ENST00000638567 CABP1Q9NZU7 370 aa20.35■□□□□ 0.85
SCARB2-210ENST00000638567 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
SCARB2-210ENST00000638567 NSD3Q9BZ95 1437 aa20.34■□□□□ 0.85
SCARB2-210ENST00000638567 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-210ENST00000638567 NASPP49321 788 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-210ENST00000638567 RARSP54136 660 aaKnown RBP20.34■□□□□ 0.85
SCARB2-210ENST00000638567 GCC1Q96CN9 775 aa20.34■□□□□ 0.85
SCARB2-210ENST00000638567 C9orf78Q9NZ63 289 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-210ENST00000638567 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
SCARB2-210ENST00000638567 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
SCARB2-210ENST00000638567 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
SCARB2-210ENST00000638567 MCM4P33991 863 aa20.32■□□□□ 0.84
SCARB2-210ENST00000638567 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
SCARB2-210ENST00000638567 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
SCARB2-210ENST00000638567 RUFY2Q8WXA3 655 aa20.31■□□□□ 0.84
SCARB2-210ENST00000638567 ZKSCAN1P17029 563 aaPredicted RBP20.31■□□□□ 0.84
SCARB2-210ENST00000638567 CAVIN1Q6NZI2 390 aaKnown RBP20.31■□□□□ 0.84
SCARB2-210ENST00000638567 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
SCARB2-210ENST00000638567 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
SCARB2-210ENST00000638567 RNF214Q8ND24 703 aa20.3■□□□□ 0.84
SCARB2-210ENST00000638567 TMEM57Q8N5G2 664 aa20.3■□□□□ 0.84
SCARB2-210ENST00000638567 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
SCARB2-210ENST00000638567 NEK4P51957 841 aa20.29■□□□□ 0.84
SCARB2-210ENST00000638567 CDK19Q9BWU1 502 aa20.29■□□□□ 0.84
SCARB2-210ENST00000638567 H3BQV1 296 aa20.29■□□□□ 0.84
SCARB2-210ENST00000638567 NPHP1O15259 732 aa20.29■□□□□ 0.84
SCARB2-210ENST00000638567 TAF7LQ5H9L4 462 aa20.29■□□□□ 0.84
SCARB2-210ENST00000638567 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
SCARB2-210ENST00000638567 IFIT2P09913 472 aaKnown RBP20.28■□□□□ 0.84
SCARB2-210ENST00000638567 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
SCARB2-210ENST00000638567 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
SCARB2-210ENST00000638567 LRPPRCP42704 1394 aaKnown RBP20.28■□□□□ 0.84
SCARB2-210ENST00000638567 RABEP1Q15276 862 aa20.28■□□□□ 0.84
SCARB2-210ENST00000638567 VPS37CA5D8V6 355 aaPredicted RBP20.28■□□□□ 0.84
SCARB2-210ENST00000638567 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
SCARB2-210ENST00000638567 SF3A1Q15459 793 aaKnown RBP20.27■□□□□ 0.84
SCARB2-210ENST00000638567 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
SCARB2-210ENST00000638567 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
SCARB2-210ENST00000638567 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
SCARB2-210ENST00000638567 KIF3AQ9Y496 699 aa20.27■□□□□ 0.84
SCARB2-210ENST00000638567 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
SCARB2-210ENST00000638567 ADGRF5Q8IZF2 1346 aa20.26■□□□□ 0.83
SCARB2-210ENST00000638567 PRPF40AO75400 957 aaKnown RBP20.25■□□□□ 0.83
SCARB2-210ENST00000638567 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-210ENST00000638567 SULT6B1Q6IMI4 303 aa20.25■□□□□ 0.83
SCARB2-210ENST00000638567 NUTM2GQ5VZR2 741 aa20.24■□□□□ 0.83
SCARB2-210ENST00000638567 THUMPD2Q9BTF0 503 aaKnown RBP20.24■□□□□ 0.83
SCARB2-210ENST00000638567 K7ELQ4 463 aaPredicted RBP20.24■□□□□ 0.83
SCARB2-210ENST00000638567 IGHDP01880 384 aa20.24■□□□□ 0.83
SCARB2-210ENST00000638567 TPM4P67936 248 aa20.24■□□□□ 0.83
SCARB2-210ENST00000638567 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.24■□□□□ 0.83
SCARB2-210ENST00000638567 ZNF608Q9ULD9 1512 aaPredicted RBP20.24■□□□□ 0.83
SCARB2-210ENST00000638567 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
SCARB2-210ENST00000638567 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
SCARB2-210ENST00000638567 TXNDC2Q86VQ3 553 aa20.23■□□□□ 0.83
SCARB2-210ENST00000638567 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
SCARB2-210ENST00000638567 GOLGA6L19H0YKK7 550 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 RAPGEF3O95398 923 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 GNAI3P08754 354 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 GRPEL1Q9HAV7 217 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 SLC52A1Q9NWF4 448 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 BECN2A8MW95 431 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
SCARB2-210ENST00000638567 NLRP6P59044 892 aa20.22■□□□□ 0.83
SCARB2-210ENST00000638567 TULP1O00294 542 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-210ENST00000638567 FCHSD2O94868 740 aa20.21■□□□□ 0.83
SCARB2-210ENST00000638567 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
SCARB2-210ENST00000638567 TBC1D2Q9BYX2 928 aa20.21■□□□□ 0.83
SCARB2-210ENST00000638567 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
SCARB2-210ENST00000638567 G3BP1Q13283 466 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCARB2-210ENST00000638567 KIF14Q15058 1648 aa20.2■□□□□ 0.82
SCARB2-210ENST00000638567 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
SCARB2-210ENST00000638567 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
SCARB2-210ENST00000638567 PARD3Q8TEW0 1356 aa20.19■□□□□ 0.82
SCARB2-210ENST00000638567 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms