RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 KNDC1Q76NI1 1749 aa10.13□□□□□ -0.79
MECP2-225ENST00000638041 TONSLQ96HA7 1378 aa10.13□□□□□ -0.79
MECP2-225ENST00000638041 AHDC1Q5TGY3 1603 aaPredicted RBP10.12□□□□□ -0.79
MECP2-225ENST00000638041 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
MECP2-225ENST00000638041 PRAM1Q96QH2 718 aa10.12□□□□□ -0.79
MECP2-225ENST00000638041 TRAK1Q9UPV9 953 aa10.12□□□□□ -0.79
MECP2-225ENST00000638041 MED1Q15648 1581 aaPredicted RBP10.12□□□□□ -0.79
MECP2-225ENST00000638041 GPRASP1Q5JY77 1395 aa10.12□□□□□ -0.79
MECP2-225ENST00000638041 ROBO2Q9HCK4 1378 aa10.12□□□□□ -0.79
MECP2-225ENST00000638041 C1orf167Q5SNV9 1468 aa10.11□□□□□ -0.79
MECP2-225ENST00000638041 CDC42BPGQ6DT37 1551 aa10.11□□□□□ -0.79
MECP2-225ENST00000638041 MST1RQ04912 1400 aa10.11□□□□□ -0.79
MECP2-225ENST00000638041 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
MECP2-225ENST00000638041 DLC1Q96QB1 1528 aa10.11□□□□□ -0.79
MECP2-225ENST00000638041 NRXN1Q9ULB1 1477 aa10.1□□□□□ -0.79
MECP2-225ENST00000638041 NGLY1Q96IV0 654 aa10.1□□□□□ -0.79
MECP2-225ENST00000638041 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
MECP2-225ENST00000638041 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
MECP2-225ENST00000638041 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
MECP2-225ENST00000638041 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
MECP2-225ENST00000638041 NGDNQ8NEJ9 315 aaKnown RBP10.09□□□□□ -0.79
MECP2-225ENST00000638041 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
MECP2-225ENST00000638041 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
MECP2-225ENST00000638041 ANKARQ7Z5J8 1434 aa10.08□□□□□ -0.8
MECP2-225ENST00000638041 SETD1AO15047 1707 aaKnown RBP10.08□□□□□ -0.8
MECP2-225ENST00000638041 NALCNQ8IZF0 1738 aa10.08□□□□□ -0.8
MECP2-225ENST00000638041 KIAA1210Q9ULL0 1709 aa10.08□□□□□ -0.8
MECP2-225ENST00000638041 SOCS7O14512 581 aa10.08□□□□□ -0.8
MECP2-225ENST00000638041 SAFB2Q14151 953 aaKnown RBP eCLIP10.08□□□□□ -0.8
MECP2-225ENST00000638041 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
MECP2-225ENST00000638041 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
MECP2-225ENST00000638041 SHPRHQ149N8 1683 aa10.07□□□□□ -0.8
MECP2-225ENST00000638041 ARHGEF10O15013 1369 aa10.07□□□□□ -0.8
MECP2-225ENST00000638041 WASLO00401 505 aaPredicted RBP10.07□□□□□ -0.8
MECP2-225ENST00000638041 TIMELESSQ9UNS1 1208 aa10.07□□□□□ -0.8
MECP2-225ENST00000638041 ROCK2O75116 1388 aaKnown RBP10.06□□□□□ -0.8
MECP2-225ENST00000638041 NUTM2FA1L443 756 aa10.06□□□□□ -0.8
MECP2-225ENST00000638041 FOXO3O43524 673 aa10.06□□□□□ -0.8
MECP2-225ENST00000638041 SRPK2P78362 688 aaKnown RBP10.06□□□□□ -0.8
MECP2-225ENST00000638041 KRT28Q7Z3Y7 464 aa10.06□□□□□ -0.8
MECP2-225ENST00000638041 SOS2Q07890 1332 aaPredicted RBP10.06□□□□□ -0.8
MECP2-225ENST00000638041 EVC2Q86UK5 1308 aa10.06□□□□□ -0.8
MECP2-225ENST00000638041 CENPJQ9HC77 1338 aaPredicted RBP10.06□□□□□ -0.8
MECP2-225ENST00000638041 NHSL1Q5SYE7 1610 aa10.05□□□□□ -0.8
MECP2-225ENST00000638041 RXRBP28702 533 aa10.05□□□□□ -0.8
MECP2-225ENST00000638041 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
MECP2-225ENST00000638041 ORAI2Q96SN7 254 aa10.05□□□□□ -0.8
MECP2-225ENST00000638041 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
MECP2-225ENST00000638041 COL16A1Q07092 1604 aaPredicted RBP10.04□□□□□ -0.8
MECP2-225ENST00000638041 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
MECP2-225ENST00000638041 CCDC61Q9Y6R9 512 aa10.04□□□□□ -0.8
MECP2-225ENST00000638041 BRD4O60885 1362 aaPredicted RBP10.03□□□□□ -0.8
MECP2-225ENST00000638041 PAK3O75914 559 aaPredicted RBP10.03□□□□□ -0.8
MECP2-225ENST00000638041 TRPC5Q9UL62 973 aaPredicted RBP10.03□□□□□ -0.8
MECP2-225ENST00000638041 SBNO1A3KN83 1393 aa10.02□□□□□ -0.8
MECP2-225ENST00000638041 ITSN1Q15811 1721 aa10.02□□□□□ -0.8
MECP2-225ENST00000638041 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
MECP2-225ENST00000638041 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.81
MECP2-225ENST00000638041 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
MECP2-225ENST00000638041 FMN2Q9NZ56 1722 aa10.02□□□□□ -0.81
MECP2-225ENST00000638041 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
MECP2-225ENST00000638041 ADGRB2O60241 1585 aa10.01□□□□□ -0.81
MECP2-225ENST00000638041 ADAMTS2O95450 1211 aa10.01□□□□□ -0.81
MECP2-225ENST00000638041 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
MECP2-225ENST00000638041 CDK19Q9BWU1 502 aa10.01□□□□□ -0.81
MECP2-225ENST00000638041 USP21Q9UK80 565 aa10.01□□□□□ -0.81
MECP2-225ENST00000638041 TULP4Q9NRJ4 1543 aa10.01□□□□□ -0.81
MECP2-225ENST00000638041 RBM6P78332 1123 aaKnown RBP10□□□□□ -0.81
MECP2-225ENST00000638041 PMFBP1Q8TBY8 1022 aa10□□□□□ -0.81
MECP2-225ENST00000638041 NUDT16Q96DE0 195 aaKnown RBP10□□□□□ -0.81
MECP2-225ENST00000638041 QTRT2Q9H974 415 aaKnown RBP10□□□□□ -0.81
MECP2-225ENST00000638041 AFF2P51816 1311 aa10□□□□□ -0.81
MECP2-225ENST00000638041 SPATA31A3Q5VYP0 1347 aa10□□□□□ -0.81
MECP2-225ENST00000638041 ADGRB1O14514 1584 aa10□□□□□ -0.81
MECP2-225ENST00000638041 PLEKHH1Q9ULM0 1364 aa10□□□□□ -0.81
MECP2-225ENST00000638041 TNS3Q68CZ2 1445 aa9.99□□□□□ -0.81
MECP2-225ENST00000638041 CCER1Q8TC90 406 aaPredicted RBP9.99□□□□□ -0.81
MECP2-225ENST00000638041 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
MECP2-225ENST00000638041 PCGF6Q9BYE7 350 aa9.99□□□□□ -0.81
MECP2-225ENST00000638041 ATAD2Q6PL18 1390 aa9.99□□□□□ -0.81
MECP2-225ENST00000638041 NLRP13Q86W25 1043 aa9.98□□□□□ -0.81
MECP2-225ENST00000638041 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
MECP2-225ENST00000638041 HDGFL2Q7Z4V5 671 aaPredicted RBP9.97□□□□□ -0.81
MECP2-225ENST00000638041 DDX17Q92841 729 aaKnown RBP9.97□□□□□ -0.81
MECP2-225ENST00000638041 ATP7BP35670 1465 aa9.97□□□□□ -0.81
MECP2-225ENST00000638041 XPCQ01831 940 aaPredicted RBP9.96□□□□□ -0.82
MECP2-225ENST00000638041 ABTB2Q8N961 1025 aa9.96□□□□□ -0.82
MECP2-225ENST00000638041 PUS7Q96PZ0 661 aaKnown RBP9.96□□□□□ -0.82
MECP2-225ENST00000638041 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
MECP2-225ENST00000638041 ARHGEF28Q8N1W1 1705 aaKnown RBP9.96□□□□□ -0.82
MECP2-225ENST00000638041 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
MECP2-225ENST00000638041 EVA1CP58658 441 aa9.95□□□□□ -0.82
MECP2-225ENST00000638041 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
MECP2-225ENST00000638041 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
MECP2-225ENST00000638041 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
MECP2-225ENST00000638041 UNC5CLQ8IV45 518 aa9.95□□□□□ -0.82
MECP2-225ENST00000638041 FNBP4Q8N3X1 1017 aaPredicted RBP9.95□□□□□ -0.82
MECP2-225ENST00000638041 PXDNQ92626 1479 aa9.95□□□□□ -0.82
MECP2-225ENST00000638041 CDK12Q9NYV4 1490 aaPredicted RBP9.95□□□□□ -0.82
MECP2-225ENST00000638041 COL22A1Q8NFW1 1626 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms