RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
CACNA1A-257ENST00000638009 JMYQ8N9B5 988 aa23.09■■□□□ 1.29
CACNA1A-257ENST00000638009 TRIM5Q9C035 493 aa23.08■■□□□ 1.29
CACNA1A-257ENST00000638009 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.29
CACNA1A-257ENST00000638009 MCM2P49736 904 aa23.08■■□□□ 1.29
CACNA1A-257ENST00000638009 MAP9Q49MG5 647 aa23.08■■□□□ 1.28
CACNA1A-257ENST00000638009 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 POLR3GO15318 223 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 RRP9O43818 475 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 RBM33Q96EV2 1170 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 ANKRD18BA2A2Z9 1011 aa23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 FOXD4L6Q3SYB3 417 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 FOXD4L3Q6VB84 417 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 RAD21O60216 631 aa23.06■■□□□ 1.28
CACNA1A-257ENST00000638009 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
CACNA1A-257ENST00000638009 FANCIQ9NVI1 1328 aa23.06■■□□□ 1.28
CACNA1A-257ENST00000638009 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 LUZP1Q86V48 1076 aa23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 DDX19BQ9UMR2 479 aa23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 IFIT2P09913 472 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 UACAQ9BZF9 1416 aa23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 VPS37CA5D8V6 355 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 GBP3Q9H0R5 595 aa23.03■■□□□ 1.28
CACNA1A-257ENST00000638009 C1orf141Q5JVX7 400 aa23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 PDIA4P13667 645 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 MICALCLQ6ZW33 695 aa23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 SHTN1A0MZ66 631 aa23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 SLC3A2P08195 630 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 DDX23Q9BUQ8 820 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 BCCIPQ9P287 314 aaKnown RBP eCLIP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 TAX1BP1Q86VP1 789 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 AMPHP49418 695 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 SMC2O95347 1197 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 ZKSCAN2Q63HK3 967 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 V9GYY5 206 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 HMGB1P1B2RPK0 211 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 E9PSI1 815 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 CENPHQ9H3R5 247 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 PPFIBP1Q86W92 1011 aa23■■□□□ 1.27
CACNA1A-257ENST00000638009 CCDC175P0C221 793 aa23■■□□□ 1.27
CACNA1A-257ENST00000638009 TMEM132AQ24JP5 1023 aa23■■□□□ 1.27
CACNA1A-257ENST00000638009 CCDC97Q96F63 343 aaPredicted RBP23■■□□□ 1.27
CACNA1A-257ENST00000638009 MAP2K1Q02750 393 aaPredicted RBP23■■□□□ 1.27
CACNA1A-257ENST00000638009 ZNF396Q96N95 335 aaPredicted RBP23■■□□□ 1.27
CACNA1A-257ENST00000638009 KIF2AO00139 706 aaPredicted RBP22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 CETN2P41208 172 aa22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 JAKMIP3Q5VZ66 844 aa22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 PDE4AP27815 886 aa22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 CBFA2T2O43439 604 aa22.98■■□□□ 1.27
CACNA1A-257ENST00000638009 TTLL5Q6EMB2 1281 aa22.98■■□□□ 1.27
CACNA1A-257ENST00000638009 HIP1O00291 1037 aa22.96■■□□□ 1.27
CACNA1A-257ENST00000638009 DZIP1LQ8IYY4 767 aaKnown RBP22.96■■□□□ 1.27
CACNA1A-257ENST00000638009 SKIDA1Q1XH10 827 aa22.95■■□□□ 1.27
CACNA1A-257ENST00000638009 TSPY26PQ9H489 355 aa22.95■■□□□ 1.26
CACNA1A-257ENST00000638009 CCDC192P0DO97 292 aa22.95■■□□□ 1.26
CACNA1A-257ENST00000638009 CALCOCO1Q9P1Z2 691 aa22.94■■□□□ 1.26
CACNA1A-257ENST00000638009 CRACR2AQ9BSW2 395 aa22.94■■□□□ 1.26
CACNA1A-257ENST00000638009 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-257ENST00000638009 POTEJP0CG39 1038 aa22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 G3BP1Q13283 466 aaKnown RBP eCLIP22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 CCDC9Q9Y3X0 531 aaKnown RBP22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 GIGYF2Q6Y7W6 1299 aaKnown RBP22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 IMMTQ16891 758 aaKnown RBP22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 GCOM1H8Y6P7 765 aaPredicted RBP22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 MYZAPP0CAP1 466 aa22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 TNIKQ9UKE5 1360 aa22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 TSHZ2Q9NRE2 1034 aa22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 TMCO3Q6UWJ1 677 aa22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 PDCL3Q9H2J4 239 aa22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 SAFB2Q14151 953 aaKnown RBP eCLIP22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 ANAPC15P60006 121 aa22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 ZNF397Q8NF99 534 aaPredicted RBP22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 CFAP45Q9UL16 551 aa22.89■■□□□ 1.26
CACNA1A-257ENST00000638009 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.26
CACNA1A-257ENST00000638009 NEBLO76041 1014 aa22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 ZWINTO95229 277 aa22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 KRT18P05783 430 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 CCDC148Q8NFR7 591 aa22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 LRRFIP2Q9Y608 721 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 STK26Q9P289 416 aa22.88■■□□□ 1.25
CACNA1A-257ENST00000638009 TEFQ10587 303 aa22.88■■□□□ 1.25
CACNA1A-257ENST00000638009 DAAM2Q86T65 1068 aa22.88■■□□□ 1.25
CACNA1A-257ENST00000638009 SEPT6Q14141 434 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 FBXW7Q969H0 707 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 FYB1O15117 783 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 SERPINC1P01008 464 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 C6orf163Q5TEZ5 329 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 MYBBP1AQ9BQG0 1328 aaKnown RBP22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 ANKRD1Q15327 319 aa22.86■■□□□ 1.25
CACNA1A-257ENST00000638009 SMC1AQ14683 1233 aaKnown RBP22.86■■□□□ 1.25
CACNA1A-257ENST00000638009 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms