RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	FNBP4	Q8N3X1	1017 aa	Predicted RBP	14.15	□□□□□ -0.14
CACNA1A-256	ENST00000637981	HFM1	A2PYH4	1435 aa		14.15	□□□□□ -0.14
CACNA1A-256	ENST00000637981	PRAG1	Q86YV5	1406 aa		14.15	□□□□□ -0.14
CACNA1A-256	ENST00000637981	COL22A1	Q8NFW1	1626 aa	Predicted RBP	14.14	□□□□□ -0.15
CACNA1A-256	ENST00000637981	ATRN	O75882	1429 aa		14.14	□□□□□ -0.15
CACNA1A-256	ENST00000637981	ESCO1	Q5FWF5	840 aa		14.13	□□□□□ -0.15
CACNA1A-256	ENST00000637981	RPGRIP1L	Q68CZ1	1315 aa		14.12	□□□□□ -0.15
CACNA1A-256	ENST00000637981	NPHP3	Q7Z494	1330 aa		14.12	□□□□□ -0.15
CACNA1A-256	ENST00000637981	MYOM2	P54296	1465 aa		14.12	□□□□□ -0.15
CACNA1A-256	ENST00000637981	ZRANB1	Q9UGI0	708 aa		14.11	□□□□□ -0.15
CACNA1A-256	ENST00000637981	CDC42BPG	Q6DT37	1551 aa		14.1	□□□□□ -0.15
CACNA1A-256	ENST00000637981	BCL9L	Q86UU0	1499 aa		14.1	□□□□□ -0.15
CACNA1A-256	ENST00000637981	PXDN	Q92626	1479 aa		14.1	□□□□□ -0.15
CACNA1A-256	ENST00000637981	PPL	O60437	1756 aa		14.09	□□□□□ -0.15
CACNA1A-256	ENST00000637981	FOXO3	O43524	673 aa		14.09	□□□□□ -0.15
CACNA1A-256	ENST00000637981	XPC	Q01831	940 aa	Predicted RBP	14.09	□□□□□ -0.15
CACNA1A-256	ENST00000637981	SRCAP	Q6ZRS2	3230 aa		14.08	□□□□□ -0.15
CACNA1A-256	ENST00000637981	MARF1	Q9Y4F3	1742 aa	Known RBP	14.08	□□□□□ -0.16
CACNA1A-256	ENST00000637981	CCDC125	Q86Z20	511 aa		14.08	□□□□□ -0.16
CACNA1A-256	ENST00000637981	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.08	□□□□□ -0.16
CACNA1A-256	ENST00000637981	LRPPRC	P42704	1394 aa	Known RBP	14.07	□□□□□ -0.16
CACNA1A-256	ENST00000637981	NUTM2F	A1L443	756 aa		14.07	□□□□□ -0.16
CACNA1A-256	ENST00000637981	GJD4	Q96KN9	370 aa	Predicted RBP	14.07	□□□□□ -0.16
CACNA1A-256	ENST00000637981	EP400	Q96L91	3159 aa		14.05	□□□□□ -0.16
CACNA1A-256	ENST00000637981	WAPL	Q7Z5K2	1190 aa		14.05	□□□□□ -0.16
CACNA1A-256	ENST00000637981	STK26	Q9P289	416 aa		14.05	□□□□□ -0.16
CACNA1A-256	ENST00000637981	IFT172	Q9UG01	1749 aa		14.04	□□□□□ -0.16
CACNA1A-256	ENST00000637981	TRIM26	Q12899	539 aa	Predicted RBP	14.04	□□□□□ -0.16
CACNA1A-256	ENST00000637981	ADGRF5	Q8IZF2	1346 aa		14.04	□□□□□ -0.16
CACNA1A-256	ENST00000637981	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.03	□□□□□ -0.16
CACNA1A-256	ENST00000637981	UNC5CL	Q8IV45	518 aa		14.03	□□□□□ -0.16
CACNA1A-256	ENST00000637981	TECPR2	O15040	1411 aa		14.03	□□□□□ -0.16
CACNA1A-256	ENST00000637981	ACIN1	Q9UKV3	1341 aa	Known RBP	14.02	□□□□□ -0.17
CACNA1A-256	ENST00000637981	RALGAPB	Q86X10	1494 aa		14.02	□□□□□ -0.17
CACNA1A-256	ENST00000637981	SLIT2	O94813	1529 aa		14.01	□□□□□ -0.17
CACNA1A-256	ENST00000637981	RGL3	Q3MIN7	710 aa		14.01	□□□□□ -0.17
CACNA1A-256	ENST00000637981	SPATA31A3	Q5VYP0	1347 aa		14.01	□□□□□ -0.17
CACNA1A-256	ENST00000637981	PLEKHH1	Q9ULM0	1364 aa		14.01	□□□□□ -0.17
CACNA1A-256	ENST00000637981	GLI3	P10071	1580 aa		14.01	□□□□□ -0.17
CACNA1A-256	ENST00000637981	TMEM132E	Q6IEE7	984 aa		14	□□□□□ -0.17
CACNA1A-256	ENST00000637981	ABCC11	Q96J66	1382 aa		14	□□□□□ -0.17
CACNA1A-256	ENST00000637981	CCDC144A	A2RUR9	1427 aa		14	□□□□□ -0.17
CACNA1A-256	ENST00000637981	BLM	P54132	1417 aa	Predicted RBP	14	□□□□□ -0.17
CACNA1A-256	ENST00000637981	KIF1A	Q12756	1690 aa		14	□□□□□ -0.17
CACNA1A-256	ENST00000637981	USP32	Q8NFA0	1604 aa		13.99	□□□□□ -0.17
CACNA1A-256	ENST00000637981	KNDC1	Q76NI1	1749 aa		13.99	□□□□□ -0.17
CACNA1A-256	ENST00000637981	FMN2	Q9NZ56	1722 aa		13.99	□□□□□ -0.17
CACNA1A-256	ENST00000637981	ANKRD30B	Q9BXX2	1392 aa		13.98	□□□□□ -0.17
CACNA1A-256	ENST00000637981	HAP1	P54257	671 aa	Predicted RBP	13.98	□□□□□ -0.17
CACNA1A-256	ENST00000637981	KRT28	Q7Z3Y7	464 aa		13.98	□□□□□ -0.17
CACNA1A-256	ENST00000637981	SPATA31E1	Q6ZUB1	1445 aa		13.97	□□□□□ -0.17
CACNA1A-256	ENST00000637981	DEFB132	Q7Z7B7	95 aa		13.97	□□□□□ -0.17
CACNA1A-256	ENST00000637981	BRWD3	Q6RI45	1802 aa		13.97	□□□□□ -0.17
CACNA1A-256	ENST00000637981	PIK3C2G	O75747	1445 aa		13.97	□□□□□ -0.17
CACNA1A-256	ENST00000637981	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.97	□□□□□ -0.17
CACNA1A-256	ENST00000637981	SF3B2	Q13435	895 aa	Known RBP	13.96	□□□□□ -0.17
CACNA1A-256	ENST00000637981	SEPT12	Q8IYM1	358 aa		13.96	□□□□□ -0.17
CACNA1A-256	ENST00000637981	TNS3	Q68CZ2	1445 aa		13.96	□□□□□ -0.18
CACNA1A-256	ENST00000637981	PLEKHG5	O94827	1062 aa		13.95	□□□□□ -0.18
CACNA1A-256	ENST00000637981	CABLES1	Q8TDN4	633 aa		13.95	□□□□□ -0.18
CACNA1A-256	ENST00000637981	CCDC9	Q9Y3X0	531 aa	Known RBP	13.95	□□□□□ -0.18
CACNA1A-256	ENST00000637981	PSME1	Q06323	249 aa		13.94	□□□□□ -0.18
CACNA1A-256	ENST00000637981	VPS72	Q15906	364 aa		13.94	□□□□□ -0.18
CACNA1A-256	ENST00000637981	PHF8	Q9UPP1	1060 aa		13.94	□□□□□ -0.18
CACNA1A-256	ENST00000637981	RGPD8	O14715	1765 aa	Predicted RBP	13.93	□□□□□ -0.18
CACNA1A-256	ENST00000637981	LMOD2	Q6P5Q4	547 aa		13.93	□□□□□ -0.18
CACNA1A-256	ENST00000637981	PLCH1	Q4KWH8	1693 aa		13.93	□□□□□ -0.18
CACNA1A-256	ENST00000637981	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.92	□□□□□ -0.18
CACNA1A-256	ENST00000637981	SIRT1	Q96EB6	747 aa		13.92	□□□□□ -0.18
CACNA1A-256	ENST00000637981	MPHOSPH9	Q99550	1183 aa		13.92	□□□□□ -0.18
CACNA1A-256	ENST00000637981	NWD2	Q9ULI1	1742 aa		13.92	□□□□□ -0.18
CACNA1A-256	ENST00000637981	NRXN1	Q9ULB1	1477 aa		13.92	□□□□□ -0.18
CACNA1A-256	ENST00000637981	ONECUT3	O60422	494 aa	Predicted RBP	13.91	□□□□□ -0.18
CACNA1A-256	ENST00000637981	HRC	P23327	699 aa		13.91	□□□□□ -0.18
CACNA1A-256	ENST00000637981	KRT27	Q7Z3Y8	459 aa		13.91	□□□□□ -0.18
CACNA1A-256	ENST00000637981	SBNO1	A3KN83	1393 aa		13.91	□□□□□ -0.18
CACNA1A-256	ENST00000637981	ARHGEF10	O15013	1369 aa		13.91	□□□□□ -0.18
CACNA1A-256	ENST00000637981	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CACNA1A-256	ENST00000637981	ABCA3	Q99758	1704 aa		13.9	□□□□□ -0.18
CACNA1A-256	ENST00000637981	C14orf93	Q9H972	538 aa	Known RBP	13.9	□□□□□ -0.18
CACNA1A-256	ENST00000637981		A0A0G2JS52	829 aa		13.9	□□□□□ -0.19
CACNA1A-256	ENST00000637981	FAM83G	A6ND36	823 aa		13.9	□□□□□ -0.19
CACNA1A-256	ENST00000637981	MYT1	Q01538	1121 aa		13.9	□□□□□ -0.19
CACNA1A-256	ENST00000637981	DHX57	Q6P158	1386 aa	Known RBP	13.89	□□□□□ -0.19
CACNA1A-256	ENST00000637981	CFAP70	Q5T0N1	1121 aa		13.89	□□□□□ -0.19
CACNA1A-256	ENST00000637981	PRAM1	Q96QH2	718 aa		13.89	□□□□□ -0.19
CACNA1A-256	ENST00000637981	LRP5	O75197	1615 aa		13.88	□□□□□ -0.19
CACNA1A-256	ENST00000637981	BAG6	P46379	1132 aa		13.88	□□□□□ -0.19
CACNA1A-256	ENST00000637981	PMFBP1	Q8TBY8	1022 aa		13.88	□□□□□ -0.19
CACNA1A-256	ENST00000637981	FAM98C	Q17RN3	349 aa	Known RBP	13.87	□□□□□ -0.19
CACNA1A-256	ENST00000637981	RAB3GAP2	Q9H2M9	1393 aa		13.87	□□□□□ -0.19
CACNA1A-256	ENST00000637981	ANKAR	Q7Z5J8	1434 aa		13.86	□□□□□ -0.19
CACNA1A-256	ENST00000637981	PSD	A5PKW4	1024 aa	Predicted RBP	13.86	□□□□□ -0.19
CACNA1A-256	ENST00000637981	BTG4	Q9NY30	223 aa		13.86	□□□□□ -0.19
CACNA1A-256	ENST00000637981	POGK	Q9P215	609 aa		13.86	□□□□□ -0.19
CACNA1A-256	ENST00000637981	NRAP	Q86VF7	1730 aa		13.85	□□□□□ -0.19
CACNA1A-256	ENST00000637981	DLC1	Q96QB1	1528 aa		13.84	□□□□□ -0.19
CACNA1A-256	ENST00000637981	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.83	□□□□□ -0.19
CACNA1A-256	ENST00000637981	PCGF6	Q9BYE7	350 aa		13.83	□□□□□ -0.2
CACNA1A-256	ENST00000637981	ADGRB2	O60241	1585 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms