RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 IFT57Q9NWB7 429 aa20.56■□□□□ 0.88
CACNA1A-253ENST00000637927 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
CACNA1A-253ENST00000637927 ENOX2Q16206 610 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-253ENST00000637927 FMNL2Q96PY5 1086 aa20.56■□□□□ 0.88
CACNA1A-253ENST00000637927 RBM42Q9BTD8 480 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-253ENST00000637927 KIF3AQ9Y496 699 aa20.56■□□□□ 0.88
CACNA1A-253ENST00000637927 RIPK4P57078 832 aa20.55■□□□□ 0.88
CACNA1A-253ENST00000637927 CENPHQ9H3R5 247 aa20.54■□□□□ 0.88
CACNA1A-253ENST00000637927 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-253ENST00000637927 APAF1O14727 1248 aa20.54■□□□□ 0.88
CACNA1A-253ENST00000637927 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
CACNA1A-253ENST00000637927 FKBP5Q13451 457 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-253ENST00000637927 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
CACNA1A-253ENST00000637927 PUS7Q96PZ0 661 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-253ENST00000637927 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
CACNA1A-253ENST00000637927 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
CACNA1A-253ENST00000637927 NEBLO76041 1014 aa20.53■□□□□ 0.88
CACNA1A-253ENST00000637927 KIF15Q9NS87 1388 aa20.52■□□□□ 0.88
CACNA1A-253ENST00000637927 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
CACNA1A-253ENST00000637927 EVC2Q86UK5 1308 aa20.52■□□□□ 0.88
CACNA1A-253ENST00000637927 SF3B2Q13435 895 aaKnown RBP20.52■□□□□ 0.87
CACNA1A-253ENST00000637927 ZKSCAN2Q63HK3 967 aa20.51■□□□□ 0.87
CACNA1A-253ENST00000637927 RIC3Q7Z5B4 369 aa20.51■□□□□ 0.87
CACNA1A-253ENST00000637927 TRMT1LQ7Z2T5 733 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-253ENST00000637927 TAX1BP1Q86VP1 789 aa20.51■□□□□ 0.87
CACNA1A-253ENST00000637927 PDCL3Q9H2J4 239 aa20.51■□□□□ 0.87
CACNA1A-253ENST00000637927 H0YHG0 523 aa20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 MAP4K4O95819 1239 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 FAM193AP78312 1265 aa20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 TSPYL4Q9UJ04 414 aa20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 CDK5RAP3Q96JB5 506 aa20.5■□□□□ 0.87
CACNA1A-253ENST00000637927 MPHOSPH10O00566 681 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-253ENST00000637927 SSR1P43307 286 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-253ENST00000637927 SASS6Q6UVJ0 657 aa20.49■□□□□ 0.87
CACNA1A-253ENST00000637927 SYCP1Q15431 976 aa20.49■□□□□ 0.87
CACNA1A-253ENST00000637927 FAM177A1Q8N128 213 aaPredicted RBP20.49■□□□□ 0.87
CACNA1A-253ENST00000637927 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
CACNA1A-253ENST00000637927 G3BP1Q13283 466 aaKnown RBP eCLIP20.48■□□□□ 0.87
CACNA1A-253ENST00000637927 SEPT7Q16181 437 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-253ENST00000637927 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
CACNA1A-253ENST00000637927 RSPH4AQ5TD94 716 aa20.48■□□□□ 0.87
CACNA1A-253ENST00000637927 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-253ENST00000637927 CPLX2Q6PUV4 134 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 ATF3P18847 181 aa20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 WIZO95785 1651 aa20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 MNS1Q8NEH6 495 aa20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 CABP2Q9NPB3 220 aa20.47■□□□□ 0.87
CACNA1A-253ENST00000637927 TEX35Q5T0J7 233 aa20.46■□□□□ 0.87
CACNA1A-253ENST00000637927 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
CACNA1A-253ENST00000637927 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
CACNA1A-253ENST00000637927 SMC2O95347 1197 aa20.45■□□□□ 0.86
CACNA1A-253ENST00000637927 TANGO6Q9C0B7 1094 aa20.45■□□□□ 0.86
CACNA1A-253ENST00000637927 DDX11L8A8MPP1 907 aa20.45■□□□□ 0.86
CACNA1A-253ENST00000637927 RNF214Q8ND24 703 aa20.45■□□□□ 0.86
CACNA1A-253ENST00000637927 TSPYL1Q9H0U9 437 aa20.44■□□□□ 0.86
CACNA1A-253ENST00000637927 STK3Q13188 491 aa20.44■□□□□ 0.86
CACNA1A-253ENST00000637927 PDE4AP27815 886 aa20.44■□□□□ 0.86
CACNA1A-253ENST00000637927 ZSCAN29Q8IWY8 852 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-253ENST00000637927 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
CACNA1A-253ENST00000637927 HMGN5P82970 282 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-253ENST00000637927 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-253ENST00000637927 SPC24Q8NBT2 197 aa20.43■□□□□ 0.86
CACNA1A-253ENST00000637927 RRP1P56182 461 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-253ENST00000637927 LNPKQ9C0E8 428 aa20.42■□□□□ 0.86
CACNA1A-253ENST00000637927 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
CACNA1A-253ENST00000637927 CENPQQ7L2Z9 268 aaPredicted RBP20.42■□□□□ 0.86
CACNA1A-253ENST00000637927 TMEM87AQ8NBN3 555 aa20.42■□□□□ 0.86
CACNA1A-253ENST00000637927 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
CACNA1A-253ENST00000637927 SAFBQ15424 915 aaKnown RBP eCLIP20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 WWC3Q9ULE0 1092 aa20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 AXDND1Q5T1B0 1012 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 SERPINA10Q9UK55 444 aa20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 RUFY2Q8WXA3 655 aa20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 E9PSI1 815 aa20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 ZKSCAN1P17029 563 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 VGFO15240 615 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
CACNA1A-253ENST00000637927 RALYLQ86SE5 291 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 CCDC173Q0VFZ6 552 aa20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 TAF3Q5VWG9 929 aa20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 OLFM4Q6UX06 510 aa20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 SMC3Q9UQE7 1217 aa20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 LIG1P18858 919 aa20.4■□□□□ 0.86
CACNA1A-253ENST00000637927 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.86
CACNA1A-253ENST00000637927 SSBP05455 408 aaKnown RBP eCLIP20.39■□□□□ 0.85
CACNA1A-253ENST00000637927 TTLL12Q14166 644 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-253ENST00000637927 CCDC85AQ96PX6 553 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-253ENST00000637927 LRRFIP1Q32MZ4 808 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-253ENST00000637927 PANK1Q8TE04 598 aa20.37■□□□□ 0.85
CACNA1A-253ENST00000637927 BRMS1Q9HCU9 246 aa20.37■□□□□ 0.85
CACNA1A-253ENST00000637927 SCLT1Q96NL6 688 aa20.37■□□□□ 0.85
CACNA1A-253ENST00000637927 SIL1Q9H173 461 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms