RNA–Protein interactions for RNA: ENST00000637909.1

CLCN2-221, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-221ENST00000637909 RCAN3Q9UKA8 241 aa14.02□□□□□ -0.16
CLCN2-221ENST00000637909 KDM5AP29375 1690 aaKnown RBP14.02□□□□□ -0.16
CLCN2-221ENST00000637909 RNF123Q5XPI4 1314 aa14.02□□□□□ -0.17
CLCN2-221ENST00000637909 DHX37Q8IY37 1157 aaKnown RBP14.01□□□□□ -0.17
CLCN2-221ENST00000637909 PPLO60437 1756 aa14.01□□□□□ -0.17
CLCN2-221ENST00000637909 PLIN1O60240 522 aa14.01□□□□□ -0.17
CLCN2-221ENST00000637909 ARHGAP31Q2M1Z3 1444 aa14□□□□□ -0.17
CLCN2-221ENST00000637909 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
CLCN2-221ENST00000637909 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
CLCN2-221ENST00000637909 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
CLCN2-221ENST00000637909 EXOC6Q8TAG9 804 aa13.98□□□□□ -0.17
CLCN2-221ENST00000637909 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
CLCN2-221ENST00000637909 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
CLCN2-221ENST00000637909 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CLCN2-221ENST00000637909 ADGRB1O14514 1584 aa13.97□□□□□ -0.17
CLCN2-221ENST00000637909 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
CLCN2-221ENST00000637909 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
CLCN2-221ENST00000637909 PREX1Q8TCU6 1659 aa13.96□□□□□ -0.17
CLCN2-221ENST00000637909 PDE3BQ13370 1112 aa13.96□□□□□ -0.17
CLCN2-221ENST00000637909 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
CLCN2-221ENST00000637909 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.17
CLCN2-221ENST00000637909 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
CLCN2-221ENST00000637909 A0A0U1RQG5 324 aaPredicted RBP13.95□□□□□ -0.18
CLCN2-221ENST00000637909 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
CLCN2-221ENST00000637909 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
CLCN2-221ENST00000637909 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
CLCN2-221ENST00000637909 APAF1O14727 1248 aa13.94□□□□□ -0.18
CLCN2-221ENST00000637909 SLC52A1Q9NWF4 448 aa13.94□□□□□ -0.18
CLCN2-221ENST00000637909 SETBP1Q9Y6X0 1596 aa13.94□□□□□ -0.18
CLCN2-221ENST00000637909 MYO5BQ9ULV0 1848 aa13.94□□□□□ -0.18
CLCN2-221ENST00000637909 KCNA4P22459 653 aa13.94□□□□□ -0.18
CLCN2-221ENST00000637909 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
CLCN2-221ENST00000637909 CEBPAP49715 358 aaPredicted RBP13.94□□□□□ -0.18
CLCN2-221ENST00000637909 PIK3C2BO00750 1634 aa13.93□□□□□ -0.18
CLCN2-221ENST00000637909 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
CLCN2-221ENST00000637909 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
CLCN2-221ENST00000637909 MYO3AQ8NEV4 1616 aa13.92□□□□□ -0.18
CLCN2-221ENST00000637909 NPC1L1Q9UHC9 1359 aa13.92□□□□□ -0.18
CLCN2-221ENST00000637909 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
CLCN2-221ENST00000637909 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
CLCN2-221ENST00000637909 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
CLCN2-221ENST00000637909 PRAM1Q96QH2 718 aa13.9□□□□□ -0.18
CLCN2-221ENST00000637909 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
CLCN2-221ENST00000637909 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
CLCN2-221ENST00000637909 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
CLCN2-221ENST00000637909 AAMPQ13685 434 aa13.89□□□□□ -0.19
CLCN2-221ENST00000637909 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
CLCN2-221ENST00000637909 POGKQ9P215 609 aa13.89□□□□□ -0.19
CLCN2-221ENST00000637909 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
CLCN2-221ENST00000637909 C3P01024 1663 aa13.89□□□□□ -0.19
CLCN2-221ENST00000637909 RIMS1Q86UR5 1692 aaKnown RBP13.89□□□□□ -0.19
CLCN2-221ENST00000637909 DUSP27Q5VZP5 1158 aa13.89□□□□□ -0.19
CLCN2-221ENST00000637909 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
CLCN2-221ENST00000637909 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
CLCN2-221ENST00000637909 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
CLCN2-221ENST00000637909 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
CLCN2-221ENST00000637909 INSRP06213 1382 aa13.88□□□□□ -0.19
CLCN2-221ENST00000637909 MTHFSP49914 203 aa13.87□□□□□ -0.19
CLCN2-221ENST00000637909 TMEM131LA2VDJ0 1609 aa13.87□□□□□ -0.19
CLCN2-221ENST00000637909 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
CLCN2-221ENST00000637909 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
CLCN2-221ENST00000637909 TNRQ92752 1358 aa13.87□□□□□ -0.19
CLCN2-221ENST00000637909 ZNF521Q96K83 1311 aa13.86□□□□□ -0.19
CLCN2-221ENST00000637909 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
CLCN2-221ENST00000637909 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
CLCN2-221ENST00000637909 SKAP1Q86WV1 359 aa13.86□□□□□ -0.19
CLCN2-221ENST00000637909 MSH5O43196 834 aa13.85□□□□□ -0.19
CLCN2-221ENST00000637909 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
CLCN2-221ENST00000637909 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
CLCN2-221ENST00000637909 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
CLCN2-221ENST00000637909 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
CLCN2-221ENST00000637909 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.84□□□□□ -0.19
CLCN2-221ENST00000637909 YTHDC2Q9H6S0 1430 aaKnown RBP13.83□□□□□ -0.2
CLCN2-221ENST00000637909 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
CLCN2-221ENST00000637909 ANKRD36BQ8N2N9 1353 aa13.82□□□□□ -0.2
CLCN2-221ENST00000637909 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
CLCN2-221ENST00000637909 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
CLCN2-221ENST00000637909 PTPRMP28827 1452 aa13.81□□□□□ -0.2
CLCN2-221ENST00000637909 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
CLCN2-221ENST00000637909 BCAR3O75815 825 aa13.8□□□□□ -0.2
CLCN2-221ENST00000637909 ALKQ9UM73 1620 aa13.8□□□□□ -0.2
CLCN2-221ENST00000637909 FBLN1P23142 703 aa13.8□□□□□ -0.2
CLCN2-221ENST00000637909 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
CLCN2-221ENST00000637909 U2AF1L5P0DN76 240 aaPredicted RBP13.79□□□□□ -0.2
CLCN2-221ENST00000637909 U2AF1Q01081 240 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLCN2-221ENST00000637909 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
CLCN2-221ENST00000637909 A2ML1A8K2U0 1454 aa13.79□□□□□ -0.2
CLCN2-221ENST00000637909 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
CLCN2-221ENST00000637909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLCN2-221ENST00000637909 RIMS2Q9UQ26 1411 aa13.78□□□□□ -0.2
CLCN2-221ENST00000637909 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
CLCN2-221ENST00000637909 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
CLCN2-221ENST00000637909 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.2
CLCN2-221ENST00000637909 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
CLCN2-221ENST00000637909 FYB1O15117 783 aa13.77□□□□□ -0.21
CLCN2-221ENST00000637909 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.21
CLCN2-221ENST00000637909 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
CLCN2-221ENST00000637909 RUNDC1Q96C34 613 aa13.77□□□□□ -0.21
CLCN2-221ENST00000637909 FANCIQ9NVI1 1328 aa13.76□□□□□ -0.21
CLCN2-221ENST00000637909 E9PSI1 815 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms