RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 PPLO60437 1756 aa18.24■□□□□ 0.51
CACNA1A-250ENST00000637809 FNBP4Q8N3X1 1017 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-250ENST00000637809 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
CACNA1A-250ENST00000637809 TECPR2O15040 1411 aa18.22■□□□□ 0.51
CACNA1A-250ENST00000637809 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
CACNA1A-250ENST00000637809 MYOM2P54296 1465 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 WAPLQ7Z5K2 1190 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 MPHOSPH9Q99550 1183 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 USP21Q9UK80 565 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 PXDNQ92626 1479 aa18.2■□□□□ 0.5
CACNA1A-250ENST00000637809 ANKRD30BQ9BXX2 1392 aa18.19■□□□□ 0.5
CACNA1A-250ENST00000637809 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
CACNA1A-250ENST00000637809 FOXO3O43524 673 aa18.18■□□□□ 0.5
CACNA1A-250ENST00000637809 STK26Q9P289 416 aa18.18■□□□□ 0.5
CACNA1A-250ENST00000637809 TRPC5Q9UL62 973 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-250ENST00000637809 COL22A1Q8NFW1 1626 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-250ENST00000637809 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
CACNA1A-250ENST00000637809 ATRNO75882 1429 aa18.17■□□□□ 0.5
CACNA1A-250ENST00000637809 EP400Q96L91 3159 aa18.17■□□□□ 0.5
CACNA1A-250ENST00000637809 TMEM132EQ6IEE7 984 aa18.17■□□□□ 0.5
CACNA1A-250ENST00000637809 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
CACNA1A-250ENST00000637809 XPCQ01831 940 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-250ENST00000637809 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
CACNA1A-250ENST00000637809 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.49
CACNA1A-250ENST00000637809 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
CACNA1A-250ENST00000637809 YTHDC2Q9H6S0 1430 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-250ENST00000637809 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
CACNA1A-250ENST00000637809 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
CACNA1A-250ENST00000637809 C14orf93Q9H972 538 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-250ENST00000637809 SPATA31A3Q5VYP0 1347 aa18.09■□□□□ 0.49
CACNA1A-250ENST00000637809 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
CACNA1A-250ENST00000637809 NRXN1Q9ULB1 1477 aa18.08■□□□□ 0.49
CACNA1A-250ENST00000637809 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-250ENST00000637809 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
CACNA1A-250ENST00000637809 SLIT2O94813 1529 aa18.05■□□□□ 0.48
CACNA1A-250ENST00000637809 KRT28Q7Z3Y7 464 aa18.05■□□□□ 0.48
CACNA1A-250ENST00000637809 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
CACNA1A-250ENST00000637809 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
CACNA1A-250ENST00000637809 PHF8Q9UPP1 1060 aa18.03■□□□□ 0.48
CACNA1A-250ENST00000637809 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-250ENST00000637809 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-250ENST00000637809 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
CACNA1A-250ENST00000637809 KIF1AQ12756 1690 aa18.02■□□□□ 0.47
CACNA1A-250ENST00000637809 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
CACNA1A-250ENST00000637809 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
CACNA1A-250ENST00000637809 MARF1Q9Y4F3 1742 aaKnown RBP18■□□□□ 0.47
CACNA1A-250ENST00000637809 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
CACNA1A-250ENST00000637809 CCDC125Q86Z20 511 aa17.99■□□□□ 0.47
CACNA1A-250ENST00000637809 CABLES1Q8TDN4 633 aa17.99■□□□□ 0.47
CACNA1A-250ENST00000637809 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
CACNA1A-250ENST00000637809 GLI3P10071 1580 aa17.99■□□□□ 0.47
CACNA1A-250ENST00000637809 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
CACNA1A-250ENST00000637809 PSME1Q06323 249 aa17.98■□□□□ 0.47
CACNA1A-250ENST00000637809 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-250ENST00000637809 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
CACNA1A-250ENST00000637809 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
CACNA1A-250ENST00000637809 ADGRB1O14514 1584 aa17.96■□□□□ 0.47
CACNA1A-250ENST00000637809 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
CACNA1A-250ENST00000637809 VPS72Q15906 364 aa17.95■□□□□ 0.46
CACNA1A-250ENST00000637809 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
CACNA1A-250ENST00000637809 ARHGEF10O15013 1369 aa17.94■□□□□ 0.46
CACNA1A-250ENST00000637809 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
CACNA1A-250ENST00000637809 POGKQ9P215 609 aa17.94■□□□□ 0.46
CACNA1A-250ENST00000637809 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-250ENST00000637809 HAP1P54257 671 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-250ENST00000637809 ADGRB2O60241 1585 aa17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 PLEKHG5O94827 1062 aa17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 SEPT12Q8IYM1 358 aa17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
CACNA1A-250ENST00000637809 LMOD2Q6P5Q4 547 aa17.91■□□□□ 0.46
CACNA1A-250ENST00000637809 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-250ENST00000637809 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-250ENST00000637809 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-250ENST00000637809 DEFB132Q7Z7B7 95 aa17.88■□□□□ 0.45
CACNA1A-250ENST00000637809 ABCA3Q99758 1704 aa17.87■□□□□ 0.45
CACNA1A-250ENST00000637809 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-250ENST00000637809 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
CACNA1A-250ENST00000637809 KDM2AQ9Y2K7 1162 aa17.87■□□□□ 0.45
CACNA1A-250ENST00000637809 KRT27Q7Z3Y8 459 aa17.86■□□□□ 0.45
CACNA1A-250ENST00000637809 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-250ENST00000637809 EIF3AQ14152 1382 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-250ENST00000637809 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
CACNA1A-250ENST00000637809 PLCH1Q4KWH8 1693 aa17.86■□□□□ 0.45
CACNA1A-250ENST00000637809 NWD2Q9ULI1 1742 aa17.86■□□□□ 0.45
CACNA1A-250ENST00000637809 GPRASP1Q5JY77 1395 aa17.85■□□□□ 0.45
CACNA1A-250ENST00000637809 TRPM3Q9HCF6 1732 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-250ENST00000637809 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
CACNA1A-250ENST00000637809 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
CACNA1A-250ENST00000637809 BRWD3Q6RI45 1802 aa17.83■□□□□ 0.44
CACNA1A-250ENST00000637809 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-250ENST00000637809 ALS2Q96Q42 1657 aa17.82■□□□□ 0.44
CACNA1A-250ENST00000637809 HRCP23327 699 aa17.81■□□□□ 0.44
CACNA1A-250ENST00000637809 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms