RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
CHD2-228ENST00000637613 ARXQ96QS3 562 aa7.49□□□□□ -1.21
CHD2-228ENST00000637613 H3BM21 787 aa7.48□□□□□ -1.21
CHD2-228ENST00000637613 J3QL48 77 aa7.48□□□□□ -1.21
CHD2-228ENST00000637613 BRPF1P55201 1214 aaPredicted RBP7.48□□□□□ -1.21
CHD2-228ENST00000637613 RCCD1A6NED2 376 aa7.47□□□□□ -1.21
CHD2-228ENST00000637613 ZBTB24O43167 697 aaPredicted RBP7.47□□□□□ -1.21
CHD2-228ENST00000637613 HPS1Q92902 700 aa7.47□□□□□ -1.21
CHD2-228ENST00000637613 TESPA1A2RU30 521 aaPredicted RBP7.46□□□□□ -1.22
CHD2-228ENST00000637613 GSK3AP49840 483 aa7.46□□□□□ -1.22
CHD2-228ENST00000637613 E2F4Q16254 413 aa7.46□□□□□ -1.22
CHD2-228ENST00000637613 PUS10Q3MIT2 529 aaKnown RBP7.46□□□□□ -1.22
CHD2-228ENST00000637613 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.22
CHD2-228ENST00000637613 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.22
CHD2-228ENST00000637613 ERBB4Q15303 1308 aa7.46□□□□□ -1.22
CHD2-228ENST00000637613 MRGPRX2Q96LB1 330 aa7.45□□□□□ -1.22
CHD2-228ENST00000637613 THAP11Q96EK4 314 aa7.44□□□□□ -1.22
CHD2-228ENST00000637613 VEGFBP49765 207 aa7.43□□□□□ -1.22
CHD2-228ENST00000637613 FAM160A2Q8N612 972 aaPredicted RBP7.43□□□□□ -1.22
CHD2-228ENST00000637613 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
CHD2-228ENST00000637613 SEMA3EO15041 775 aa7.41□□□□□ -1.22
CHD2-228ENST00000637613 TRIM32Q13049 653 aa7.41□□□□□ -1.22
CHD2-228ENST00000637613 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
CHD2-228ENST00000637613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.4□□□□□ -1.22
CHD2-228ENST00000637613 MORN1Q5T089 497 aa7.4□□□□□ -1.22
CHD2-228ENST00000637613 RSPH4AQ5TD94 716 aa7.4□□□□□ -1.22
CHD2-228ENST00000637613 ZMYND10O75800 440 aa7.39□□□□□ -1.23
CHD2-228ENST00000637613 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
CHD2-228ENST00000637613 PTGDRQ13258 359 aa7.39□□□□□ -1.23
CHD2-228ENST00000637613 C14orf37Q86TY3 774 aa7.39□□□□□ -1.23
CHD2-228ENST00000637613 PRDM9Q9NQV7 894 aa7.39□□□□□ -1.23
CHD2-228ENST00000637613 SALL2Q9Y467 1007 aaPredicted RBP7.38□□□□□ -1.23
CHD2-228ENST00000637613 GDF11O95390 407 aa7.37□□□□□ -1.23
CHD2-228ENST00000637613 TRIM46Q7Z4K8 759 aa7.37□□□□□ -1.23
CHD2-228ENST00000637613 SLC24A3Q9HC58 644 aa7.37□□□□□ -1.23
CHD2-228ENST00000637613 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
CHD2-228ENST00000637613 RASSF7Q02833 373 aa7.36□□□□□ -1.23
CHD2-228ENST00000637613 MSS51Q4VC12 460 aa7.36□□□□□ -1.23
CHD2-228ENST00000637613 BMP1P13497 986 aa7.35□□□□□ -1.23
CHD2-228ENST00000637613 FAM161AQ3B820 660 aa7.35□□□□□ -1.23
CHD2-228ENST00000637613 XP32Q5T750 250 aa7.35□□□□□ -1.23
CHD2-228ENST00000637613 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
CHD2-228ENST00000637613 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
CHD2-228ENST00000637613 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
CHD2-228ENST00000637613 SLC27A5Q9Y2P5 690 aa7.34□□□□□ -1.23
CHD2-228ENST00000637613 ATP6V1AP38606 617 aa7.33□□□□□ -1.24
CHD2-228ENST00000637613 SMYD5Q6GMV2 418 aa7.33□□□□□ -1.24
CHD2-228ENST00000637613 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
CHD2-228ENST00000637613 FUT2Q10981 343 aa7.32□□□□□ -1.24
CHD2-228ENST00000637613 RC3H1Q5TC82 1133 aaKnown RBP7.32□□□□□ -1.24
CHD2-228ENST00000637613 CAPN5O15484 640 aaPredicted RBP7.31□□□□□ -1.24
CHD2-228ENST00000637613 FECHP22830 423 aa7.31□□□□□ -1.24
CHD2-228ENST00000637613 HOMEZQ8IX15 550 aa7.31□□□□□ -1.24
CHD2-228ENST00000637613 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
CHD2-228ENST00000637613 ALDH1A1P00352 501 aa7.3□□□□□ -1.24
CHD2-228ENST00000637613 WNT7BP56706 349 aa7.3□□□□□ -1.24
CHD2-228ENST00000637613 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
CHD2-228ENST00000637613 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
CHD2-228ENST00000637613 IGHA1P01876 353 aa7.29□□□□□ -1.24
CHD2-228ENST00000637613 MMP16P51512 607 aa7.29□□□□□ -1.24
CHD2-228ENST00000637613 OATP04181 439 aa7.28□□□□□ -1.24
CHD2-228ENST00000637613 SKOR1P84550 965 aa7.28□□□□□ -1.24
CHD2-228ENST00000637613 ZFP42Q96MM3 310 aa7.28□□□□□ -1.24
CHD2-228ENST00000637613 RNF19BQ6ZMZ0 732 aa7.26□□□□□ -1.25
CHD2-228ENST00000637613 RDH13Q8NBN7 331 aa7.26□□□□□ -1.25
CHD2-228ENST00000637613 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
CHD2-228ENST00000637613 AK7Q96M32 723 aa7.25□□□□□ -1.25
CHD2-228ENST00000637613 DNMT3AQ9Y6K1 912 aaPredicted RBP7.25□□□□□ -1.25
CHD2-228ENST00000637613 SIAH2O43255 324 aa7.23□□□□□ -1.25
CHD2-228ENST00000637613 DXOO77932 396 aaKnown RBP7.23□□□□□ -1.25
CHD2-228ENST00000637613 MLLT3P42568 568 aaPredicted RBP7.23□□□□□ -1.25
CHD2-228ENST00000637613 GCGRP47871 477 aa7.23□□□□□ -1.25
CHD2-228ENST00000637613 METTL3Q86U44 580 aaKnown RBP7.23□□□□□ -1.25
CHD2-228ENST00000637613 ADAMTS8Q9UP79 889 aa7.23□□□□□ -1.25
CHD2-228ENST00000637613 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
CHD2-228ENST00000637613 WASF2Q9Y6W5 498 aa7.22□□□□□ -1.25
CHD2-228ENST00000637613 NUTM2FA1L443 756 aa7.21□□□□□ -1.26
CHD2-228ENST00000637613 FOXK2Q01167 660 aa7.21□□□□□ -1.26
CHD2-228ENST00000637613 Q3C1V9 767 aa7.21□□□□□ -1.26
CHD2-228ENST00000637613 FCHSD2O94868 740 aa7.2□□□□□ -1.26
CHD2-228ENST00000637613 GRIPAP1Q4V328 841 aa7.2□□□□□ -1.26
CHD2-228ENST00000637613 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
CHD2-228ENST00000637613 DDX11L8A8MPP1 907 aa7.19□□□□□ -1.26
CHD2-228ENST00000637613 SUPT5HO00267 1087 aaKnown RBP7.18□□□□□ -1.26
CHD2-228ENST00000637613 TRIM66O15016 1216 aa7.18□□□□□ -1.26
CHD2-228ENST00000637613 SCARF1Q14162 830 aa7.18□□□□□ -1.26
CHD2-228ENST00000637613 MRPL14Q6P1L8 145 aaKnown RBP7.18□□□□□ -1.26
CHD2-228ENST00000637613 CCDC24Q8N4L8 307 aa7.18□□□□□ -1.26
CHD2-228ENST00000637613 EHBP1Q8NDI1 1231 aa7.18□□□□□ -1.26
CHD2-228ENST00000637613 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
CHD2-228ENST00000637613 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
CHD2-228ENST00000637613 GPR37O15354 613 aa7.17□□□□□ -1.26
CHD2-228ENST00000637613 SULF1Q8IWU6 871 aa7.17□□□□□ -1.26
CHD2-228ENST00000637613 USB1Q9BQ65 265 aaKnown RBP7.17□□□□□ -1.26
CHD2-228ENST00000637613 KDM4CQ9H3R0 1056 aa7.17□□□□□ -1.26
CHD2-228ENST00000637613 SOBPA7XYQ1 873 aa7.16□□□□□ -1.26
CHD2-228ENST00000637613 KRTAP9-2Q9BYQ4 174 aa7.16□□□□□ -1.26
CHD2-228ENST00000637613 PPFIA3O75145 1194 aa7.15□□□□□ -1.26
CHD2-228ENST00000637613 PDE4DQ08499 809 aa7.15□□□□□ -1.26
CHD2-228ENST00000637613 KANK3Q6NY19 840 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms