RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
CLN8-214ENST00000637594 ABCC11Q96J66 1382 aa13.2□□□□□ -0.3
CLN8-214ENST00000637594 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
CLN8-214ENST00000637594 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
CLN8-214ENST00000637594 FOXD1Q16676 465 aa13.19□□□□□ -0.3
CLN8-214ENST00000637594 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
CLN8-214ENST00000637594 USP21Q9UK80 565 aa13.19□□□□□ -0.3
CLN8-214ENST00000637594 TECPR2O15040 1411 aa13.19□□□□□ -0.3
CLN8-214ENST00000637594 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
CLN8-214ENST00000637594 PPLO60437 1756 aa13.18□□□□□ -0.3
CLN8-214ENST00000637594 RGS12O14924 1447 aa13.18□□□□□ -0.3
CLN8-214ENST00000637594 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
CLN8-214ENST00000637594 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
CLN8-214ENST00000637594 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
CLN8-214ENST00000637594 FOXO3O43524 673 aa13.16□□□□□ -0.3
CLN8-214ENST00000637594 RGL3Q3MIN7 710 aa13.16□□□□□ -0.3
CLN8-214ENST00000637594 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
CLN8-214ENST00000637594 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
CLN8-214ENST00000637594 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
CLN8-214ENST00000637594 MYOM2P54296 1465 aa13.15□□□□□ -0.3
CLN8-214ENST00000637594 PXDNQ92626 1479 aa13.15□□□□□ -0.3
CLN8-214ENST00000637594 ATRNO75882 1429 aa13.14□□□□□ -0.31
CLN8-214ENST00000637594 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
CLN8-214ENST00000637594 STK26Q9P289 416 aa13.14□□□□□ -0.31
CLN8-214ENST00000637594 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
CLN8-214ENST00000637594 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
CLN8-214ENST00000637594 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
CLN8-214ENST00000637594 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
CLN8-214ENST00000637594 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
CLN8-214ENST00000637594 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
CLN8-214ENST00000637594 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
CLN8-214ENST00000637594 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
CLN8-214ENST00000637594 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
CLN8-214ENST00000637594 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
CLN8-214ENST00000637594 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
CLN8-214ENST00000637594 NRXN1Q9ULB1 1477 aa13.09□□□□□ -0.31
CLN8-214ENST00000637594 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.31
CLN8-214ENST00000637594 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
CLN8-214ENST00000637594 PSME1Q06323 249 aa13.08□□□□□ -0.32
CLN8-214ENST00000637594 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
CLN8-214ENST00000637594 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
CLN8-214ENST00000637594 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
CLN8-214ENST00000637594 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
CLN8-214ENST00000637594 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
CLN8-214ENST00000637594 SLIT2O94813 1529 aa13.07□□□□□ -0.32
CLN8-214ENST00000637594 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CLN8-214ENST00000637594 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
CLN8-214ENST00000637594 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
CLN8-214ENST00000637594 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
CLN8-214ENST00000637594 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
CLN8-214ENST00000637594 VPS72Q15906 364 aa13.03□□□□□ -0.32
CLN8-214ENST00000637594 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
CLN8-214ENST00000637594 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.32
CLN8-214ENST00000637594 HRCP23327 699 aa13.02□□□□□ -0.33
CLN8-214ENST00000637594 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
CLN8-214ENST00000637594 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
CLN8-214ENST00000637594 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
CLN8-214ENST00000637594 ANKARQ7Z5J8 1434 aa13.01□□□□□ -0.33
CLN8-214ENST00000637594 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
CLN8-214ENST00000637594 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
CLN8-214ENST00000637594 FAM83GA6ND36 823 aa13□□□□□ -0.33
CLN8-214ENST00000637594 POGKQ9P215 609 aa13□□□□□ -0.33
CLN8-214ENST00000637594 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
CLN8-214ENST00000637594 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
CLN8-214ENST00000637594 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
CLN8-214ENST00000637594 SAFB2Q14151 953 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLN8-214ENST00000637594 GLI3P10071 1580 aa12.98□□□□□ -0.33
CLN8-214ENST00000637594 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
CLN8-214ENST00000637594 EP400Q96L91 3159 aa12.97□□□□□ -0.33
CLN8-214ENST00000637594 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
CLN8-214ENST00000637594 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
CLN8-214ENST00000637594 USP32Q8NFA0 1604 aa12.97□□□□□ -0.33
CLN8-214ENST00000637594 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
CLN8-214ENST00000637594 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.33
CLN8-214ENST00000637594 DCAF11Q8TEB1 546 aa12.96□□□□□ -0.33
CLN8-214ENST00000637594 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.33
CLN8-214ENST00000637594 EIF3AQ14152 1382 aaKnown RBP12.95□□□□□ -0.34
CLN8-214ENST00000637594 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
CLN8-214ENST00000637594 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
CLN8-214ENST00000637594 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
CLN8-214ENST00000637594 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
CLN8-214ENST00000637594 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
CLN8-214ENST00000637594 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
CLN8-214ENST00000637594 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
CLN8-214ENST00000637594 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
CLN8-214ENST00000637594 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
CLN8-214ENST00000637594 HIRIP3Q9BW71 556 aaPredicted RBP12.93□□□□□ -0.34
CLN8-214ENST00000637594 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
CLN8-214ENST00000637594 MINK1Q8N4C8 1332 aaPredicted RBP12.92□□□□□ -0.34
CLN8-214ENST00000637594 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
CLN8-214ENST00000637594 BTG4Q9NY30 223 aa12.92□□□□□ -0.34
CLN8-214ENST00000637594 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
CLN8-214ENST00000637594 TULP4Q9NRJ4 1543 aa12.9□□□□□ -0.34
CLN8-214ENST00000637594 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
CLN8-214ENST00000637594 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
CLN8-214ENST00000637594 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
CLN8-214ENST00000637594 TRPM3Q9HCF6 1732 aaPredicted RBP12.89□□□□□ -0.35
CLN8-214ENST00000637594 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
CLN8-214ENST00000637594 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
CLN8-214ENST00000637594 BRWD3Q6RI45 1802 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms